Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0759 ATGGAGTTACCATTACGGACCGCAATTCTCCATTCCTCTTCTTCCCTTCAACCGAGATTTCACACTCACAAACCCACTCAAGATTTAACCTCACCCTTCTCCTTGTTCATTGCAAATTCACTTCGTCTTCCATGCTCCACTTTTGCTTCCAAAGATCAGCAACATTACTTTCCAGCCACTGCACGTGAAACAAGGGCAGTGCTGAATCCCATCAGTAAAGGGTTTTCATGCACTGGTGCCTCTTGTGGTGATAGTTATTGTGATGATGATGATGGCATGGGGTTCTTGGATAACTATGAAATGATCTTTAGAGATTGTGACAAGCTAATCGAGTCTTTCATGTTGCATGAGACCGATTGGAGAAAGTTTTTAATTTTAAACAAGAAGTGGAGCAATATTAGGTCCCATTTCTTTAGACACTGTCGGGATAAAGCAGATACCATAGACAATCCAGTGCTGAAGAACAAACTGCTATGGCTTGGAAAGAAGCTTAAAGAGATAGATGAAGAGTTGCAGAGACACAATGAACTTATCCTAATGATCAAAGACAATCCATCTGAAATTAGTGAAATTGTTTCAAGGAGTCGTAGAGATTTCACAAAAGAATTCTTTATGCATCTTCATACCATAGCTGAATCTTCTGTCGACAATATTGAAACACAAAATGATTTTGCAAAGCTTTGGAACATGTGCTTGGCTGCTGTAAAAGTTTACGACAGTACAATTGAAAGCATTGAAGCACTAAATGCTGCAGAATTGAACTTCCAAGATATTATGAAGTCTCCCTCGGATGCTTCCTGCTGGAAGATAGACAACATAGGTGAGAAAAATCAATGCTTCAATCCAGAATTAGTAGCTCATTGGCTACAATTGTGTTATAATGTGGAAGAAGTCGGAAGGGTACATGCAATTGTCTTGAAATGTTTTAGACATTCAAATACTTATGTTGATAATAATTTGATTTGTAGTTATTTAAGATTGGTTGAGTTGGTTCGGGCTCGTCGTGTGTTTGATGGAATGCCAAGAAAGAATACGGTTACATGGACTGCTATCATTGATGGATATTTAAAATGTAACTTGGATGATGAGGCTTTTAAGTTATTTCAAGATTCTGTTAAACATGGGGTTCCAGCCAACAGTAAGATGTTTGTTTGTATCATGAATTTGTGTGGTAAAAGAGTGAATTTAAAGCTGGGGAAACAAATCCATGCTCGCATTTTGAAAAGCAGATGGAGGAATTTAATTGTGGACAATGCAGTTGTTCATTTCTATGCACAATGTGGAGATATATCAAGTGCATTTCGGGCATTTGATTGTATGGCAGAGCGAGATGTAATATGTTGGACAACTATGATCACTGCCTGTTCCCAACAAGGGTTTGGGTATGAAGCTATGTTATTGTTGTCACAAATGCTAGGTGAAGGGTTCTTTCCTAATGAATATACTATATGTAGTGCACTAAAGGCTTGTGGAAAGAATAAAGCATTGAAATTTGGAACACAACTTCATGGTGCCATAATAAAGAATATTTGTAAGAGTGATGTTTTTATAGGAACTTCCCTAGTTGATATGTATGCAAAATGTGGATTGATGAAGGATTCTAAAGACGTGTTTGATAGAATGAGAATTAGAAATACAGCTACTTGGACATGTATTATATCAGGATATGCTCGAAATGGGTTTGGTAAAGAGGCCGTAAACTTGTTTCGATCAATGGAGAGTAAAAGAATGCATGTTAATAAATTGACAGTTTTAAGTGTCTTGATGGCTTGTGGCACAATTAAAGCTTTGCTAATTGGAAGAGAGGTTCATGCACAGATAATCAAACGTATTATCCATACGAACATGTACATAGGAAGCACTTTGGTATGGTTCTATTGCAAGTGTAAAGAATACTCTTATGCTTTCAAGGTGCTCCAGCACATGCCATTTAGGGATGTTGTTTCTTGGACTGCCATTATCTCTGGTTGTGCCAGACTTGGGCTTGAACTTGAGGCTCTGGAGTTTTTGCAAGAAATGATGGAAGATGGCGTGTTGCCTAATTCCTATACTTACTCATCAGCCTTGAAAGCTTGTGCAGAACTAGAAGCTCCAATGCTTGGAAAGTTAATTCATTCCTATGCAAGCAAGTCTCCTGCCTCGGCTAATGTATTTGTGAACAGTGCTTTAATATACATGTATTCAAAATGCGGATATGTTGCTGATGCTTTTCAAGTTTTTGACAACATGCCAGAGAGGAATTTGGTTTCTTGGGAATCCATGATCTTGGCTTATGCATGGAATGGACATGCTAGAGAGGCTCTGAAGCTCGTGCACAGAATGCAAGCTGAAGGTTTAGTGGTGGATGATTATATCCATACAACAGTTGTTAGTGCTTGTGGAGGTGTTGAGCATGGAGACATTCATCAGAATAGTGAATCTTCACATTACTTGCATTCTTCGTAA 2445 0.3832 MELPLRTAILHSSSSLQPRFHTHKPTQDLTSPFSLFIANSLRLPCSTFASKDQQHYFPATARETRAVLNPISKGFSCTGASCGDSYCDDDDGMGFLDNYEMIFRDCDKLIESFMLHETDWRKFLILNKKWSNIRSHFFRHCRDKADTIDNPVLKNKLLWLGKKLKEIDEELQRHNELILMIKDNPSEISEIVSRSRRDFTKEFFMHLHTIAESSVDNIETQNDFAKLWNMCLAAVKVYDSTIESIEALNAAELNFQDIMKSPSDASCWKIDNIGEKNQCFNPELVAHWLQLCYNVEEVGRVHAIVLKCFRHSNTYVDNNLICSYLRLVELVRARRVFDGMPRKNTVTWTAIIDGYLKCNLDDEAFKLFQDSVKHGVPANSKMFVCIMNLCGKRVNLKLGKQIHARILKSRWRNLIVDNAVVHFYAQCGDISSAFRAFDCMAERDVICWTTMITACSQQGFGYEAMLLLSQMLGEGFFPNEYTICSALKACGKNKALKFGTQLHGAIIKNICKSDVFIGTSLVDMYAKCGLMKDSKDVFDRMRIRNTATWTCIISGYARNGFGKEAVNLFRSMESKRMHVNKLTVLSVLMACGTIKALLIGREVHAQIIKRIIHTNMYIGSTLVWFYCKCKEYSYAFKVLQHMPFRDVVSWTAIISGCARLGLELEALEFLQEMMEDGVLPNSYTYSSALKACAELEAPMLGKLIHSYASKSPASANVFVNSALIYMYSKCGYVADAFQVFDNMPERNLVSWESMILAYAWNGHAREALKLVHRMQAEGLVVDDYIHTTVVSACGGVEHGDIHQNSESSHYLHSS* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0759 814 PANTHER OS03G0644100 PROTEIN 733 796 - -
Pvu10g0759 814 PANTHER OS03G0644100 PROTEIN 283 741 - -
Pvu10g0759 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 444 478 IPR002885 -
Pvu10g0759 814 Gene3D Tetratricopeptide repeat domain 597 699 IPR011990 GO:0005515
Pvu10g0759 814 Gene3D Tetratricopeptide repeat domain 282 405 IPR011990 GO:0005515
Pvu10g0759 814 Gene3D Tetratricopeptide repeat domain 700 807 IPR011990 GO:0005515
Pvu10g0759 814 Gene3D Tetratricopeptide repeat domain 504 596 IPR011990 GO:0005515
Pvu10g0759 814 TIGRFAM PPR: pentatricopeptide repeat domain 346 379 IPR002885 -
Pvu10g0759 814 TIGRFAM PPR: pentatricopeptide repeat domain 446 480 IPR002885 -
Pvu10g0759 814 TIGRFAM PPR: pentatricopeptide repeat domain 721 749 IPR002885 -
Pvu10g0759 814 TIGRFAM PPR: pentatricopeptide repeat domain 548 580 IPR002885 -
Pvu10g0759 814 TIGRFAM PPR: pentatricopeptide repeat domain 648 681 IPR002885 -
Pvu10g0759 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 646 680 IPR002885 -
Pvu10g0759 814 Pfam PPR repeat 749 779 IPR002885 -
Pvu10g0759 814 Pfam PPR repeat 548 576 IPR002885 -
Pvu10g0759 814 Pfam PPR repeat 721 747 IPR002885 -
Pvu10g0759 814 Pfam PPR repeat 519 542 IPR002885 -
Pvu10g0759 814 Pfam PPR repeat 447 476 IPR002885 -
Pvu10g0759 814 Pfam PPR repeat 418 444 IPR002885 -
Pvu10g0759 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 747 781 IPR002885 -
Pvu10g0759 814 Gene3D Tetratricopeptide repeat domain 406 503 IPR011990 GO:0005515
Pvu10g0759 814 Coils Coil 164 184 - -
Pvu10g0759 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 344 378 IPR002885 -
Pvu10g0759 814 Pfam PPR repeat family 343 389 IPR002885 -
Pvu10g0759 814 Pfam PPR repeat family 645 693 IPR002885 -
Pvu10g0759 814 PANTHER OS07G0578800 PROTEIN-RELATED 733 796 IPR045215 GO:0003723|GO:0009451
Pvu10g0759 814 PANTHER OS07G0578800 PROTEIN-RELATED 283 741 IPR045215 GO:0003723|GO:0009451
Pvu10g0759 814 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 545 579 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0759 Pvu-Chr10 21430642 21434579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0759 377 806 Glycoside Hydrolase AT3G49170 29.025 2.63e-52 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0759 - - gmx:100806316 1360.13