Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0752 ATGAGTTCCATCGAGCTCCTCCACATACAGCCCCAGGAGCTTCAATTTGCCTTTGAATTGAGGAAGCAGATCTCATGCTCTTTGCAGTTGTCTAACAAGACAGACAACTATGTGGCTTTCAAGGTTAAGACAACAAATCCTAAGAAATACTGTGTTAGACCTAACACTGGAGTTGTGATGCCTAGGTCCACATGTGATATCACAGTAACAATGCAATCGCAAAAGGAGGCGCCCCTAGACATGCAATGCAAGGATAAGTTTCTCCTTCAGAGTGTAGTTGCAAGCCCTGGTGCAACCACAAAAGATATCACTCCAGAAATGTTCAATAAAGAATCTGGTCATGATGTTGAAGAGTGCAAGTTGAGAGTTGTTTATGTTGCTCCTCCTCAACCACCATCCCCTGTTCGAGAAGGATCTGATGAAGATTCTTCACCTCGTGCATCTGTATCTGAAAATGGGCATTCAAATGCTTTGGAATTTACTGCAGCTTCAAAAGCTTTCAATGAGCGGGGTGAGCATCAGGACACTTCTTTTGAGGCAAGAACTCATATTTCAAAGCTAACTGAGGAGAGGAATTCTATTATTGAGCAAAACAAAAGACTTCAGCAAGAACTGGAGCCTTTGAGGCGCCAAGCCCGCAGAAGCCGCCGCGACGGCATACCATTCATGTACGTAGTTCTTGTTGGCATCATTGGCATCATTCTGGGTTTCCTACTGAAGAGGACGTGA 729 0.4444 MSSIELLHIQPQELQFAFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVMPRSTCDITVTMQSQKEAPLDMQCKDKFLLQSVVASPGATTKDITPEMFNKESGHDVEECKLRVVYVAPPQPPSPVREGSDEDSSPRASVSENGHSNALEFTAASKAFNERGEHQDTSFEARTHISKLTEERNSIIEQNKRLQQELEPLRRQARRSRRDGIPFMYVVLVGIIGIILGFLLKRT* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0752 242 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Pvu10g0752 242 Coils Coil 184 218 - -
Pvu10g0752 242 SUPERFAMILY PapD-like 6 140 IPR008962 -
Pvu10g0752 242 PIRSF VAMP_assoc_prot 1 241 IPR016763 GO:0005789
Pvu10g0752 242 Gene3D Immunoglobulins 2 130 IPR013783 -
Pvu10g0752 242 MobiDBLite consensus disorder prediction 127 155 - -
Pvu10g0752 242 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 240 - -
Pvu10g0752 242 Pfam MSP (Major sperm protein) domain 7 110 IPR000535 -
Pvu10g0752 242 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 240 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0752 Pvu-Chr10 20142149 20145976 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0752 - - gmx:100779655 422.935