Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0743 ATGTTGACGCAGCAGGTGCTGCATCTGCCACCCCAGAAACTGTTCCTCTGCTATTCCCCTTTAGATGTTAGAAAAATCCCATCTTTTGTGAATTGTGAAAATGGGTATGTTCATAGTTACAGCAGAGTAAATGCACTAACTTTGGATGAACTTCCCCCAAACGCTCTTCGGAGGAAGAGAGAGCCGCAATGGAGAGGAGGCTTCAGCCTTGGGCTCGACTTGGGATTGGCTCGCACTGGCCTTGCCCTCAGCAAAGGCTTCTCCATTCGCCCCTTAGCCGTTTTGGAACTGCGAGGACAGAAGCTTGAGCTTCGGATTGTTAACATTGCCGAACAAGAGGAGGTTGATGAGTTTATAATTGGGCTTCCAAAATCTGCTGATGGGAAGGAAACACCTCAGTCGAACAAAGTCCGAAGTGTTGCTGGAAGGCTTGCTGTTCAAGCTGCTGAGAGGGGTTGGAGAGTATATCTACAAGATGAACATGGGACAACGACAGAAGCCATGGATCGAATGGTCAACATGGGTTTGAGTAAGTCCTGTCAGCAAAAGAAACTTGATGCCTTTGCTGCCATGATGGTACTGGAGAGATATTTTTCCACTTCAGGTGAGGGTACTGAACTTGTTCTGCCCAAAAATCTAGAATTACAAGCAAAACTTCAAAGGGGTCCTCCCAAAGATGTTGATTTTTTCTCGGATGAAGATTAA 705 0.4638 MLTQQVLHLPPQKLFLCYSPLDVRKIPSFVNCENGYVHSYSRVNALTLDELPPNALRRKREPQWRGGFSLGLDLGLARTGLALSKGFSIRPLAVLELRGQKLELRIVNIAEQEEVDEFIIGLPKSADGKETPQSNKVRSVAGRLAVQAAERGWRVYLQDEHGTTTEAMDRMVNMGLSKSCQQKKLDAFAAMMVLERYFSTSGEGTELVLPKNLELQAKLQRGPPKDVDFFSDED* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0743 234 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 39 233 IPR005227 GO:0006364
Pvu10g0743 234 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 39 233 - -
Pvu10g0743 234 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 70 198 IPR005227 GO:0006364
Pvu10g0743 234 Hamap Putative pre-16S rRNA nuclease [yqgF]. 67 202 IPR005227 GO:0006364
Pvu10g0743 234 Gene3D - 69 206 IPR037027 GO:0006139
Pvu10g0743 234 CDD YqgF 70 198 IPR005227 GO:0006364
Pvu10g0743 234 Pfam Holliday junction resolvase 69 199 IPR005227 GO:0006364
Pvu10g0743 234 SUPERFAMILY Ribonuclease H-like 68 200 IPR012337 -
Pvu10g0743 234 SMART rnase_8s 67 167 IPR006641 GO:0006139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0743 - - gmx:100810356 382.874