Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0725 ATGCACAGCAGTGTAGATAGTTCTTCATTGCTTCAAAAGAATAGTAGGAAAAGAATGTTTCCTCAATCTGATGGGGTTTTTCCTGATACCAAAGATGATGGTTATATGCCAAAACAGACTTCTTTGTGTGTTTTGATGCTATATTACACAGAGAATGGTCTCTTTCCTCTGGCACAAACTACATGGGAGCAGCTCCTATATAGTTCTTTTGTACCTTCTGTTGAATTTATTTCAAGATTATTTGATGCTTATGCAAAACATGGAAAATTCGATGAAGTGGTTAATATCTTACGCTACGTGGATATGAGGAATTTCAGTATATTACCTAATGTTTACTCGTTGGCTATCTGTTGTTTTGGAAGAGAAGGACAGCTTGAGTTAATGGAAGATATGGCAAAGGAAATGGCTTCAAGAGGTGTCCATGTCTCTTCTAAAACTGGTAATGCTTTTGTTTTGTATTATAGCATTTTTGGTTCTTTGAAAGACATGGAGAATGCGTATGGCCGCCTTAAGAAATCGAGATTTCTGATAGAGAGGGAAGTTATTCGGGCCATGGCCTCCGCATATACAAGGGAGAGACAATTCTATGAATTGGGTGAGTTCATAAGAGATGTTGGTCTAGGTAGGAAAGATCTGGGAAATCTTTTATGGAACCTTATGTTACTTTCTTATGCTGTTAATTTCAAGATGAAAAGCTTGCAGAAAGAATTTCTCCAAATGGTGGAATCTGGATTTCGTCCTGATATTACGACCTTTAATATTCGTGCTTTAGCCTTCTCAAGGATGGCTTTGTTCTGGGATCTCCACCTTAGCATTGAACATATGGAACATGAGAATGTCATTCCTGATCTAGTGACTTTTGGGTGTGTAGTTGATGCATACTTGGACAGAGGGCTTGGAAGGAACTTGAACTTTGCTCTAAACAAAATGAACTTGGATGATTCTCCAATGTTGTTAACAGATCCGTTTGTGTACGAGGCCTTAGAATTTGAGTCCTGCGTATAG 1005 0.3831 MHSSVDSSSLLQKNSRKRMFPQSDGVFPDTKDDGYMPKQTSLCVLMLYYTENGLFPLAQTTWEQLLYSSFVPSVEFISRLFDAYAKHGKFDEVVNILRYVDMRNFSILPNVYSLAICCFGREGQLELMEDMAKEMASRGVHVSSKTGNAFVLYYSIFGSLKDMENAYGRLKKSRFLIEREVIRAMASAYTRERQFYELGEFIRDVGLGRKDLGNLLWNLMLLSYAVNFKMKSLQKEFLQMVESGFRPDITTFNIRALAFSRMALFWDLHLSIEHMEHENVIPDLVTFGCVVDAYLDRGLGRNLNFALNKMNLDDSPMLLTDPFVYEALEFESCV* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0725 334 MobiDBLite consensus disorder prediction 1 19 - -
Pvu10g0725 334 Gene3D Tetratricopeptide repeat domain 6 206 IPR011990 GO:0005515
Pvu10g0725 334 PANTHER OS08G0520200 PROTEIN 4 328 - -
Pvu10g0725 334 Pfam PPR repeat 112 140 IPR002885 -
Pvu10g0725 334 Pfam PPR repeat 80 98 IPR002885 -
Pvu10g0725 334 PANTHER OS08G0520200 PROTEIN 4 328 - -
Pvu10g0725 334 MobiDBLite consensus disorder prediction 1 28 - -
Pvu10g0725 334 Gene3D Tetratricopeptide repeat domain 211 309 IPR011990 GO:0005515
Pvu10g0725 334 TIGRFAM PPR: pentatricopeptide repeat domain 111 142 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0725 Pvu-Chr10 18112529 18115951 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0725 - - pvu:PHAVU_010G069800g 659.448