Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0712 ATGGGGGAGCTTGTAGCAGCGGTGCACACTGCTACTAACGCTTTGCAAGCATTAGGGAGGGGTTTTGATGTGAATTTTGACACGAGGTTGCTTTATTGTAAAGGAGTTTCAGGGTCTAGGGTAGTTGAGATTGATGAAGAACACCGTAGGGAGCTGTTTCTCTATGATGATGTGGCTGTTCCTGACGTTTCCAGGGACATTGGATGCTCCCAGGAGGCCATGGAGCGTCAGAGTTCTGGGGTCTGCACGTTTCCTGAGATGGTGGAATACTTTAATGGAAGGGCAAATATATCAGGGAACTTTCCTCTTGGGAGTTTTAATGCCGCATTTAGCTTCACTGGTTCAAAACATGTTGATGCTGCAGCCACAAAAACCTTGTCTACAGAAGGGTTTTACATTCCTCTTGCAAAGGTTCAGCTTAAAAAATCTCACTTAACGTTGCAAGTAAATGTCAAAAAGGCTGTCCCAGTCAATTGGGATCCACCGGCTTTGGCAAGTTTTATCGAAAATTTTGGGACTCATGTCATTACATCTATAACTATTGGTGGTAAAGATGTTATTTATGTTAAACAACACCATACTTCTCCTTTGCTAAAGTTGGAGATGAAAAACTATATTCAGGATATTGGAAATCAGAGGTTCTCTGACATCAATAGTCAAACAAGTTCAGGTCAAACAAAATCCAAGGATAAGGGTGTTGATCCATTTTCATTCAATAGTCAAGGGGTTTACCCCCAACCCACAACTGCAACATATCCTTCTGGGAAAGAAGATGTCACAGTTATTTTTAGAAGAAGAGGAGGAGATGATTTAGAACAAAACCACAGTAAATGGCTATCAACTGTGAAGTCCTCCCCAGATATCATTGAGATGACTTTCTGTCCTATAACTGCTCTACTTGATGAAATACCTGCCAAGGAGCATTTGATTCGTGCCATTGGTCTTTATCTTGAATTTAAACCTCCAATTGAAGAACTTAGATATTTCCTAGAGTTTCAGATTCCTCGTGTATGGGCCCCTTTACAAGACAGGATTCCTGGTCAACAAAGGAAGGAACCTGTGTGTCCATCTTTGCAATTCAGCATAATGGGCCAGAAACTTTACATCAGTCAAGAACAGATTACAGTGGGACGTAGGCCAGTAACTGGATTACGTCTCTGTCTAGAAGGAAGCAAGCAGAATCGGCTGAGAATTCTGGTTCAACACTTGGTATTACTTCCAAAAATCCTCCATCCATATTGGGACAGCCATGTTGCTATAGGTGCTCCCAAGTGGCAGGGACCCGAGGAGCAAGACAGCCGATGGTTTGAACCAGTTAAATGGAAGAACTTTTCTCATGTGAGCACTGCACCAATTGAGAACCCTGAAACCTTCATAGGAGACTTCTCTGGCATCCACATAGTTACTGGAGCACAGCTTGGAGTGTGGGATTTCGGTTCACGGAATGTGCTGTACATGAAGCTCTTATATTCAAGGTTACCCGGCTGCACGATTCGAAGATCGCTGTGGGATCATGTTGGAAACAGTTCATCAAAAACAGTGAATGTTGGAAACACCTCCAACTCAGATAACTCAACCCTCGGAGAAAATGCCACAGGGAACAAGTTGATGAAGTATGTTGACTTGTCTGGGATGACAAAAGAGCCCCAAGATCCTCCTGGCCATTGGCTAGTCACTGGTGGAAAGCTTGGTGTGGAAAAAGGGAAAATTGTTTTGAGAGTGAAATATTCATTGCTTAATTATTGA 1746 0.4284 MGELVAAVHTATNALQALGRGFDVNFDTRLLYCKGVSGSRVVEIDEEHRRELFLYDDVAVPDVSRDIGCSQEAMERQSSGVCTFPEMVEYFNGRANISGNFPLGSFNAAFSFTGSKHVDAAATKTLSTEGFYIPLAKVQLKKSHLTLQVNVKKAVPVNWDPPALASFIENFGTHVITSITIGGKDVIYVKQHHTSPLLKLEMKNYIQDIGNQRFSDINSQTSSGQTKSKDKGVDPFSFNSQGVYPQPTTATYPSGKEDVTVIFRRRGGDDLEQNHSKWLSTVKSSPDIIEMTFCPITALLDEIPAKEHLIRAIGLYLEFKPPIEELRYFLEFQIPRVWAPLQDRIPGQQRKEPVCPSLQFSIMGQKLYISQEQITVGRRPVTGLRLCLEGSKQNRLRILVQHLVLLPKILHPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIENPETFIGDFSGIHIVTGAQLGVWDFGSRNVLYMKLLYSRLPGCTIRRSLWDHVGNSSSKTVNVGNTSNSDNSTLGENATGNKLMKYVDLSGMTKEPQDPPGHWLVTGGKLGVEKGKIVLRVKYSLLNY* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0712 581 MobiDBLite consensus disorder prediction 216 250 - -
Pvu10g0712 581 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 581 IPR044663 GO:0006952|GO:0012501|GO:2000031
Pvu10g0712 581 SMART MACPF_8 123 318 IPR020864 -
Pvu10g0712 581 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 330 IPR020864 -
Pvu10g0712 581 Pfam MAC/Perforin domain 104 316 IPR020864 -
Pvu10g0712 581 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1-LIKE 6 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0712 Pvu-Chr10 17307323 17314376 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0712 - - gmx:100817248 1079.7