Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0708 ATTAGCAACATCAGCCTTAGAAGTACAAGACCATGGGGATATTTATTAAAATCACCTTTTGGGGGCGAAGGATGGATTGTTAGTGTGGACGATTTGGAAGATATAATTGGAGGGCATGTATGGTTGGGTTCCATTTGTATACTTGGTGGAATCTGGCATATCTTAACCAAACCCTTTGCATGGGCTCGGCGTGCACTTGTATGGTCTGGAGAAGCTTACTTATCTTATAGTTTAGGTGCTTTATCTATTTTTGGTTTTATTGCTTGTTGCTTTGTCTGGTTTAATAATACCGCTTATCCTAGTGAGTTTTATGGGCCCACTGGTCCAGAAGCTTCTCAAGCTCAAGCATTTACTTTTCTAGTTAGAGACCAACGTCTTGGGGCTAATGTAGGATCTGCTCAAGTA 405 0.4099 ISNISLRSTRPWGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSIFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQV 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0708 135 PANTHER PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN 1 134 IPR000932 GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684
Pvu10g0708 135 SUPERFAMILY Photosystem II antenna protein-like 5 134 IPR036001 GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684
Pvu10g0708 135 PANTHER PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN 1 134 - -
Pvu10g0708 135 Pfam Photosystem II protein 12 134 IPR000932 GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684
Pvu10g0708 135 Gene3D photosystem ii from thermosynechococcus elongatus 106 135 IPR044900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0708 Pvu-Chr10 17110832 17111420 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0708 K02705 - pvu:PHAVU_010G068100g 286.96