Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0688 GATGGATTGTTAAAGCATAGAGGCACGTATGAAATACTTTCTCCTGAAGATATTGGTTATGAAAGGTCCAATGAAGCTACTATGGTACTAGGGAAGCTAAGTGGACGCCAAGCTTTGAAAAAACGACTTAAAGAGCTTGGTTATGAACTCAAGAAGGATGAAGTTGAGAGTGTATTTCAAAACTTCAAAGCAATGGCTGAGAAAAAAAAGAGAGTTACTGATGTTGACCTTAAAGCATTGGTATCAGATAAAGTTTGTGATGTAGAACCTATTTGGAAGCTTGGTGGGTTGGAGGTGACTTGTGGAACTATGAATTTTTCATCAACAACTATTGAACTTGTTAGAATTGACGGTACCACACACGTTGCTTGTTCCGTTGGAAAAGGACCAGTGGAATCAACTTTCAAGGCTGTCGATCTCATTGTCAAGGAAGCTGTGAAAGTACACGAGTACTCACTAAATACAATCACAGGAGGCACTGATGCAATTGCAACTATACATGTTGTAATTCGTAAAGAGAATGCACACTCATGTACTTCTACTGGAAACATTGTTTATCCCACATTTAGTGGGATTGGAAAAGGAGTAGATGTTGTTGTTTCCAGTGTAGAGGCTTATCTTACTGCACTAAACAAAATGCTTGATTTCAAGGAATGA 657 0.3851 DGLLKHRGTYEILSPEDIGYERSNEATMVLGKLSGRQALKKRLKELGYELKKDEVESVFQNFKAMAEKKKRVTDVDLKALVSDKVCDVEPIWKLGGLEVTCGTMNFSSTTIELVRIDGTTHVACSVGKGPVESTFKAVDLIVKEAVKVHEYSLNTITGGTDAIATIHVVIRKENAHSCTSTGNIVYPTFSGIGKGVDVVVSSVEAYLTALNKMLDFKE* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0688 218 PANTHER 2-ISOPROPYLMALATE SYNTHASE A-LIKE ISOFORM X1 1 217 - -
Pvu10g0688 218 SUPERFAMILY 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 113 213 IPR036230 -
Pvu10g0688 218 Pfam LeuA allosteric (dimerisation) domain 72 214 IPR013709 GO:0003852|GO:0009098
Pvu10g0688 218 PANTHER HOMOCITRATE SYNTHASE-RELATED 1 217 - -
Pvu10g0688 218 Gene3D - 1 95 - -
Pvu10g0688 218 Coils Coil 36 56 - -
Pvu10g0688 218 Gene3D - 102 214 IPR036230 -
Pvu10g0688 218 SMART LeuA_dimer_2 71 214 IPR013709 GO:0003852|GO:0009098
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0688 Pvu-Chr10 13875741 13877551 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0688 K01649 - pvu:PHAVU_010G0661000 369.392