Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0671 ATGGCCTTAGCTGTGGTAGGCGGTGCTCTCCTTTCTGCTTTCTTTGACGTTCTTTTCGACAGGCTAGCTTCCCCTAAGCTTGTCAACTTCATCCGTGGAAAGAAGCCTAACAAGTTGCTTCAAAAGATGAAGAGCCATCTGCTAGTGGTTAGAGTTGTGCTTGCTGATGCTGACAAGAAACAAATCACAGACTTCAATGTCAAAGAGTGGCTCGATCTTCTCAATGATGTTGTGTACGAGGTTGACGACTTACTTGATGAAGTGTCTACTAGAGCTGCTACTCAAAAGGAGGTAAGCAATTCCTTTTCTCACCTTTTCAACAGGAAGAAAATTGCTAGTATTAGTAAGTTGAAAGACATAGTTGAAAGATTAGATGACATTTTAAAACAAAAGGAGAGTCTAGATTTGAAGGAGAATCCAGTGGAGAGAAACCAACCATGGAAAGCTCAGCCAACATCTCTGGAAGATGGATATGGTATATATGGTAGGGATAAAGACAAGGAGGTCATATTGAAGATGGTGTTAGAGGATAGAGCTGATGGTGAACAGGTGTCTGTGATTCCTACTGTAGGCATGGGTGGGGTTGGGAAAACCAGTTTGGCAAGATCTGTTTACAACGATCACAAGGGAAGTAAAGTGCTCATGACAACCCGCAATGAAAGTGTAGCGGTTGTAGTTCCTTTTCATTCTCTTAATATATATCATCTAAACAAATTGTCAAACGAAGATTGCTGGTTGGTGTTTGCAAACCATGCATTTCCTCTCTCAGAAGGCCGTGAGAATAGAGGAACTCTAGAAAAGATTGGAAAGGAGATTGTTAAAAAGTGTAATGGATTGTCTTTAGCTGCACAGTCACTTGGAGGAATGTTGAGAAGAAAGCACGCTGTTAGGGATTGGAATAATATACTTGAAAGTGACATTTGGGAACTTCCTAAAAGTCAGTGTAAAATTATTCCAGCACTCAGAATTAGTTACAATTATCTCCCTCCACACTTAAAACGGTGCTTTGTTTATTGTTCACTATCTTGTAAAAACACCAAAACAAAGGAAAAAAAGGAAAGACTTGGTGACGAGTATTTTGACGATTTGGTTTCCAGACCCTTTTTTCAATTTTCAAGTCAGCAGACTTGGGGTAATTATTTTGTAATGCATGACCTGATGCCTGATCTAGCAACATTCCTTGGCGGGGAATTCTATTTTAGAGAAGATGAACTTGGAAAAGAAACCAAAATTGATAGAAAGACTCATATTGAAGTTTTCAAAACACTAAAATTTCCAAGAACTTTCTTGCTGATCAATTGTAAAATTTCTCCATTCAACAACGAGCAGGCAGCACATAATATAGTGTCGATGCTTAAGTATTTGAGAGTTTGTTTTATCATTTGTGACTTCCAATCTCCGCCTGCTCTGCCTGATTCAATTGGTGAATTGATCCATTTGCGTTATTTAAATCTCTCTCATACAAGTACAGCAACACTGTCGGAGTCATTGTGTAATCTGTACAACCTACAGACTTTGAAATTGAGTTGGTGCTTAAATCTGACTAAGTTGCCTAGTGCCATGCAAAATCTTGCAAACTTGCGTCATCTTGAAATTTTTAAGACTTCCATAAAAGAGATGCCTAAAAGAATGGGGAAACTGAATCAAATACAGAAGTTGGATTTATATATTGTGGGCAAGCATAAAGAGAATAGCATCAAAGAACTGGGAGGACTTCCAAATCCCCATGGTTGGTTTTGTATTAAGAAATTAGAGAATGTTACTAATGGTGAAGAAGAACTAGAAGCCAGGATAATGGATAAGAAGCACATTGATGGTATATCCTTGGAATGCAACTTACAACCTCACCAGCACCTGAAAGGGCTGTCAATAAGTGGTTATAAAGGAACTGGATTTCCAGAATGGGTAGGAAACTTTTCCTCCCATAATATAACAAATCTGCATTTTTATAAGAAGGATAACATGCGTTGTTGGGAGGTGTGGAGTTCCTTCGATTCAGAAGCTTTTCCTGTACTTAGGAGTCTTAATATAGTTGATTGCCCCAAACTAAAGGGAGACTTGCCTAATCACCTTCCTGCTCTGCTAACACTCAGGATTACAAATTGTGAGCTTCTTGTCTCTTCCATACACAAAAGCAACAAAGTAACGTTTCTTGAGTTTCCTCTTTTGGTGGAACGTATAGAAGGAGGTCCAATGGTGGAGTCAATGATGGAGACCATCGCTAACATCCAACCTACTTGCCGTCAATCTTTAACATTAAAGGATTGTTCGTCAGCCATATCTTTTCCAACTGAAATTCCCGAACGCAAACGCACTTGCATACTCTTTAGCTGCTAG 2337 0.3915 MALAVVGGALLSAFFDVLFDRLASPKLVNFIRGKKPNKLLQKMKSHLLVVRVVLADADKKQITDFNVKEWLDLLNDVVYEVDDLLDEVSTRAATQKEVSNSFSHLFNRKKIASISKLKDIVERLDDILKQKESLDLKENPVERNQPWKAQPTSLEDGYGIYGRDKDKEVILKMVLEDRADGEQVSVIPTVGMGGVGKTSLARSVYNDHKGSKVLMTTRNESVAVVVPFHSLNIYHLNKLSNEDCWLVFANHAFPLSEGRENRGTLEKIGKEIVKKCNGLSLAAQSLGGMLRRKHAVRDWNNILESDIWELPKSQCKIIPALRISYNYLPPHLKRCFVYCSLSCKNTKTKEKKERLGDEYFDDLVSRPFFQFSSQQTWGNYFVMHDLMPDLATFLGGEFYFREDELGKETKIDRKTHIEVFKTLKFPRTFLLINCKISPFNNEQAAHNIVSMLKYLRVCFIICDFQSPPALPDSIGELIHLRYLNLSHTSTATLSESLCNLYNLQTLKLSWCLNLTKLPSAMQNLANLRHLEIFKTSIKEMPKRMGKLNQIQKLDLYIVGKHKENSIKELGGLPNPHGWFCIKKLENVTNGEEELEARIMDKKHIDGISLECNLQPHQHLKGLSISGYKGTGFPEWVGNFSSHNITNLHFYKKDNMRCWEVWSSFDSEAFPVLRSLNIVDCPKLKGDLPNHLPALLTLRITNCELLVSSIHKSNKVTFLEFPLLVERIEGGPMVESMMETIANIQPTCRQSLTLKDCSSAISFPTEIPERKRTCILFSC* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0671 778 Gene3D - 148 210 IPR027417 -
Pvu10g0671 778 PRINTS Disease resistance protein signature 186 201 - -
Pvu10g0671 778 PRINTS Disease resistance protein signature 498 514 - -
Pvu10g0671 778 SUPERFAMILY L domain-like 382 705 - -
Pvu10g0671 778 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 339 IPR027417 -
Pvu10g0671 778 PANTHER DISEASE RESISTANCE PROTEIN RP 209 716 IPR044974 GO:0006952
Pvu10g0671 778 PANTHER DISEASE RESISTANCE PROTEIN RP 22 208 IPR044974 GO:0006952
Pvu10g0671 778 Pfam NB-ARC domain 209 326 IPR002182 GO:0043531
Pvu10g0671 778 Gene3D - 238 328 IPR042197 -
Pvu10g0671 778 CDD RX-CC_like 40 127 IPR038005 -
Pvu10g0671 778 Pfam Rx N-terminal domain 11 99 IPR041118 -
Pvu10g0671 778 Gene3D - 18 133 - -
Pvu10g0671 778 Gene3D Ribonuclease Inhibitor 408 770 IPR032675 -
Pvu10g0671 778 PANTHER DISEASE RESISTANCE RPP13-LIKE PROTEIN 1-RELATED 209 716 - -
Pvu10g0671 778 PANTHER DISEASE RESISTANCE RPP13-LIKE PROTEIN 1-RELATED 22 208 - -
Pvu10g0671 778 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0671 Pvu-Chr10 12198957 12201812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0671 449 703 Receptor kinase-like Gene Family AT3G28890 28.519 1.74e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0671 - - pvu:PHAVU_010G064700g 1551.57