Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0669 ATGGACATAGTCAGTGACAACCTTCTTCATGCTCATCCAATACAACGACTATCCTATTCTTTTCAAAGGTTGCTGTTTTCGAGGTTTACCTTTCGGTACCCTTTGGAATCTCTCTGGCCTCGGGGGAATAACAGCAAGCACGAAGAGCTCGCCCTCGACAATGCCGTTTTGGCGGATAACGCCAAAGCGAAGGCCGTTAGAGATGACGACGAGGGTGACATATCAAAACGCAGAAATTGGGTTTTGAAGATTTTGCACGTGAAGTCCGTGTGGGAGGGGAAACAGCGCGGTGAAGGGGAGGTTGCAGTTACTGATCAAACTCAAAGCAATTACGATGGGGAGGAAGTGTGTGAATGTGATGCTTGCGGGGTTGAGGAAGATGACGATTACGACACAGTAGAGGCTGAGTTTGATAGAGGCTCCTTTTCCCGAATGCTTCGAAGGGTATCGTTAGCAGAATCTAGATTGTATGCTTAG 477 0.478 MDIVSDNLLHAHPIQRLSYSFQRLLFSRFTFRYPLESLWPRGNNSKHEELALDNAVLADNAKAKAVRDDDEGDISKRRNWVLKILHVKSVWEGKQRGEGEVAVTDQTQSNYDGEEVCECDACGVEEDDDYDTVEAEFDRGSFSRMLRRVSLAESRLYA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0669 158 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 25 158 IPR043367 GO:0008970
Pvu10g0669 158 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 25 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0669 Pvu-Chr10 12193029 12194072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0669 29 158 Acyl Lipid Metabolism Gene Families AT1G02660 34.694 5.54e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0669 - - pvu:PHAVU_010G064500g 306.99