Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0664 ATGAACACAGGAGGAAGAACACAAACTTTTAGAATCAGTGGGGCTATGCCTTTTTCTCCCAATTTTGTGGTCAAATCTGTAGGAGGCAGAAATTTGGAGAAGTATCAGCTTGGTGGGGTCATATTCGGTTGCAAGAACAGCACAATGAAAGAATGCCAATCAAAACTACTCTTTGGCTTACCAGCTAACCACTTTTCCTTTGTGAAGAACATTGATCCTGGCCTGCCTATTTTTCTATTCAACTATAGTGACAGGAAGCTCCATGGAATTTTTGAGGCATCTAGCAAGGGCAAAATGTACATTGACCCTTACGCATGGATTGATGATAATTCAGAATTGGATAGAACACAATATCCTGCACAGGTGAAAGTTCGCGTCCGGCTTCAGTGCCAGCCACTGTCTGAAGATAAATTTGCAGCAGTAATTGCAGGCAACTACTACACTCATAACCATTTCTGGTTTGAATTAGACCATAGACAAGCAAACAAACTTTCCTCATTACTAGCTTCTTTAGCATTTGCCTCTGGTTGTAATTTGAAGACGAAAACTGTGTTTCCATCTTTTCCATTTGGAAAACCTGATTCAGAGACACAACATTTTACAAGCTCATGTAAGAGAACATATTCCACTGAAGTTACTTCCTCTTTAGATGGAGACATCAGGTCATTGGATACTCAAGCAGTAGTGAAGGAGGTGAATGAGAATGACCTGAACCTTGTATATGAGAAACTAAAGGAAATTGCTCTTGGTCATTGTAGTCAAGCCTTCTCTATGTCAGACAATGTGAATGACACTCCTGATGAGAATGATGCATGCACAGTGGAAAATGATGAGAATGAGAATGACACTCCTGATGAGAATGATGTGTGCACTGTGGAAAAAGAATATCTTGGGGTGCCAGAAGATCAAGAGAAGGAAGAAGATTCAAGTACTCCACAACTTAAAACCATGAACATAATCATCATTTGGAATAATACTTGGGGGGCAGAATTGAAAATTCAGCATCTAATGGATCGTTGTAAAATCTTAGAATCAGCATCTAATCTTATTCAGACACAAGTTGAGAAGACAGTTATTGAATCACATGATGAGCGACATGTAGACCCTAAAGAGACATTATTTGTAAAAGTGCTTTTTGATGGAGAATCATGCTTATCAAGTATTGATTTGTATTGGTCTTTTCAGCTTGTGAACAAGTCTCTCTATCCTATGAACTCAACTTCAACAAACTATGGATCATATAATCCAACTTTCAACAAGTGGACATTGTGTCCCTCTTTAAATCCGAATAAGGGAAGCTTAACAGTAGTTTCTCTAACTAAACAAATACGTTCTGTTGCTGATGGTGTTTATGGCATTAACAGCTTTGTAGTTATTGAAGTGCTTGATTTAGAAATTGGAAGGTGGGTCTCTGCTAGTTCAAAGCTACACAAG 1434 0.3856 MNTGGRTQTFRISGAMPFSPNFVVKSVGGRNLEKYQLGGVIFGCKNSTMKECQSKLLFGLPANHFSFVKNIDPGLPIFLFNYSDRKLHGIFEASSKGKMYIDPYAWIDDNSELDRTQYPAQVKVRVRLQCQPLSEDKFAAVIAGNYYTHNHFWFELDHRQANKLSSLLASLAFASGCNLKTKTVFPSFPFGKPDSETQHFTSSCKRTYSTEVTSSLDGDIRSLDTQAVVKEVNENDLNLVYEKLKEIALGHCSQAFSMSDNVNDTPDENDACTVENDENENDTPDENDVCTVEKEYLGVPEDQEKEEDSSTPQLKTMNIIIIWNNTWGAELKIQHLMDRCKILESASNLIQTQVEKTVIESHDERHVDPKETLFVKVLFDGESCLSSIDLYWSFQLVNKSLYPMNSTSTNYGSYNPTFNKWTLCPSLNPNKGSLTVVSLTKQIRSVADGVYGINSFVVIEVLDLEIGRWVSASSKLHK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0664 478 SMART dcd 35 170 IPR013989 -
Pvu10g0664 478 Pfam Development and cell death domain 38 167 IPR013989 -
Pvu10g0664 478 ProSiteProfiles DCD domain profile. 35 170 IPR013989 -
Pvu10g0664 478 PANTHER - 21 478 IPR044832 GO:0034976
Pvu10g0664 478 PANTHER INFLUENZA VIRUS NS1A-BINDING PROTEIN 21 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0664 Pvu-Chr10 11958759 11961743 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0664 - - var:108346607 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0938 8 9370666 9376398 Pvu10g0664 10 11958759 11961743 PCT