Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0652 ATGGAAGACCACAAAGAGAAGATAACAGTTTCCGACCCCACACAAATGAAAATTGATGTGCAGCCAGAGCCGTTTGAGCAGAATGTGGACGTCCACGCGCCGGGAACTAGTGGCGCCTCCACCGGCTTCCTACGGCAGTGGAAGAAGAAAGATATGCTAATAAGAGGCTCATTGGGGCTAAGAGGAATTGCTCTATTTTTGTCTTTGATTTCCTTCATGCTTATGGCTAGTAACAAGCATGGTGATTGGAAAGAATTTGACAAGTACCAAGAATACAGATACTTGCTGGCTGTGGCAATTCTATCTAGTTTGTACAGTGGAGTTCAAGTGTTTCGTCAACTCCATGAACTTTCCACTGGCAAAAACACGATTCAGCAAAGAACTGCTGGGTTGATTGATTTTGTTGGAGATCAGGTTGTAGCATATCTCTTGCTGTCATCAACATCTTCAGCTATTCCAATAACAGATAGAATAAGGGAAAGTGTAGACAATAATATGTTTACGGACTCTTCAGCTGCAGCAATTGCCTTCTCCTTTTTTGCCTTCGGTTGTCTAGCACTATCAGCTGTCATATCAGGATACAATTTGTCTACCCAAACTTATATATGA 609 0.4236 MEDHKEKITVSDPTQMKIDVQPEPFEQNVDVHAPGTSGASTGFLRQWKKKDMLIRGSLGLRGIALFLSLISFMLMASNKHGDWKEFDKYQEYRYLLAVAILSSLYSGVQVFRQLHELSTGKNTIQQRTAGLIDFVGDQVVAYLLLSSTSSAIPITDRIRESVDNNMFTDSSAAAIAFSFFAFGCLALSAVISGYNLSTQTYI* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0652 202 Pfam Casparian strip membrane protein domain 56 183 IPR006702 -
Pvu10g0652 202 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 31 201 - -
Pvu10g0652 202 PANTHER CASP-LIKE PROTEIN 4B1 31 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0652 Pvu-Chr10 11282316 11284105 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0652 - - gmx:100527392 271.937