Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0648 ATGAAGAGGCAAAAACGCTCCGACTGGCAAAACGACAACCCGTTCCAGGTGCTTACGGAGGAGCTCATTTTTCTCATTCTCGACTTTCTCGAAACGGCGCCGTTGGACAAGAAGTCCTTCTCGCTCACGTGCAAGGCGTTCTACGCTGCGGAGGCCAGGCACCGCCGCGCGCTGCGGCCGCTGCGGGCGGAGCACCTTCCCGCACTCGCTGCGCGCTACCCGAGTGTCACGGACCTGGATCTCTCGCTCTGCCCGCGCGTGGGCGACGGGGCGCTCGCGCTTGTGTCTGGTGCGTACGCGGAGACGCTGCAGCGGCTGGACCTGTCGCGGTCGCGGTGGTTCACGGGGAGCGGGCTGCTGAGCGTGGGAGCGCGGTGCGGGAGCTTGGTGGAGCTGGACCTGTCGAACGCGACGGAGTTGAGGGATGCTGGGGTCGCGGCGGTGGCGCGTGCGAGGAACTTGCGGAAGCTGTGGCTGGCGAGGTGCAAGCTGGTGACGGACATGGGGATTGGGTGTATTGCGGTGGGTTGTAGGAAATTGAGGCTGATTTGCTTGAAGTGGTGTGTGGGAATTGGGGATTTGGGTGTGGATTTGGTTGCGATTAAGTGCAAGGAGCTCACATCATTGGATCTCTCGTATTTACCCATCACGGAGAAATGTCTGCCGTCAATCTTCAAATTGCAGCTTCTTGAAGATTTGGTCCTTGAAGGATGCTTTGGCATTGACGATGACAGCCTCGATGTTGATCTCTTAAAACATGGGTGCAAGACATTGAAGAAACTTGATATCTCAGGTTGTCAAAACATAAGTCTCACTGGGCTATCGAAGCTGACTGGCATTTCTGGAGGTTTGGAGAAACTCATTTTAGCAGATGGTTCTCCTGTCACCCTTGGTCTTGTTGATGGTTTAAATAAGCTTTCCATGTTGCAATCAATAGTGTTAGATGGATGCCCGGTTACTTCTGAAGGATTAAGGGCCATTGGAAGTTTGTGTATTTCACTTAGGGAGCTAAGTCTAAGCAAATGTTTGGGAGTTACAGATGAAGCTCTTTCTTTCCTTGTGTCAAAACACAAAGATTTAAGGAAGCTTGACATCACATGCTGTCGCAAGATAACTGATGGTTCCATTGCCAGCATTGCAAATTCATGCACGGCTCTCACTTCTCTGAAAATGGAGTCATGTACACTAGTTCCACAGCAAGCATTTGTCTTGATTGGACAGAAATGCCATTATCTTGAGGAGCTTGACCTAACAGATAATGAAATTGACGATGAAGGTCTTATGTCCATTTCTTCTTGTTCTAGGCTATCCAGCTTGAAAATAGGAATCTGCCTGAACATAACTGACCGAGGACTTACCTATGTTGGCTTGTTTTGCTCAAAATTAAAGGAGCTGGATCTATACAGATCTACAGGAGTAACTGATCTGGGCATTTCAGCAATTGCTGGTGGTTGCCCTGGCCTCGAGATATTAAACACGTCCTATTGTACTAGCATCACGGATAGGGCTCTAATCTCCTTGTCAAAATGTTCAAATTTGAAAACACTTGAAATTCGTGGATGTATTCTTGTTACATCCATAGGTCTGGTAGCTATTGCGATGAATTGCAGACAACTTAGCCGTCTAGACATAAAAAAGTGTTACGACATTGATGATAGTGGGATGATTCCACTTGCTCATTTCTCCCAAAATCTGAGACAGATAAATCTGTCGTATAGCTCAGTTACAGATGTTGGGCTTCTGTCACTTGCTAGTATCAGTTGCCTTCAAAGCTTTACCATGCTTCACCTGCAAGGATTGGTTCCAGGAGGACTGGCTGCAGCCTTATTAGCATGTGGAGGGCTAACAAAAGTGAAGCTTCATCTTTCTCTAAGATCTCTGTTACCTGAGCTACTTATCAGACATGTAGAAGCACGTGGCTGTGTGTTCGAATGGAGAGATAAAGAGTTTCAGGCTGAATTGGACCCGAAGTGCTGGAAATTACAGTTAGAAGATGTGATGTAG 2004 0.4835 MKRQKRSDWQNDNPFQVLTEELIFLILDFLETAPLDKKSFSLTCKAFYAAEARHRRALRPLRAEHLPALAARYPSVTDLDLSLCPRVGDGALALVSGAYAETLQRLDLSRSRWFTGSGLLSVGARCGSLVELDLSNATELRDAGVAAVARARNLRKLWLARCKLVTDMGIGCIAVGCRKLRLICLKWCVGIGDLGVDLVAIKCKELTSLDLSYLPITEKCLPSIFKLQLLEDLVLEGCFGIDDDSLDVDLLKHGCKTLKKLDISGCQNISLTGLSKLTGISGGLEKLILADGSPVTLGLVDGLNKLSMLQSIVLDGCPVTSEGLRAIGSLCISLRELSLSKCLGVTDEALSFLVSKHKDLRKLDITCCRKITDGSIASIANSCTALTSLKMESCTLVPQQAFVLIGQKCHYLEELDLTDNEIDDEGLMSISSCSRLSSLKIGICLNITDRGLTYVGLFCSKLKELDLYRSTGVTDLGISAIAGGCPGLEILNTSYCTSITDRALISLSKCSNLKTLEIRGCILVTSIGLVAIAMNCRQLSRLDIKKCYDIDDSGMIPLAHFSQNLRQINLSYSSVTDVGLLSLASISCLQSFTMLHLQGLVPGGLAAALLACGGLTKVKLHLSLRSLLPELLIRHVEARGCVFEWRDKEFQAELDPKCWKLQLEDVM* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0648 667 SUPERFAMILY RNI-like 254 502 - -
Pvu10g0648 667 PANTHER UNCHARACTERIZED 1 610 - -
Pvu10g0648 667 Gene3D Ribonuclease Inhibitor 297 400 IPR032675 -
Pvu10g0648 667 PANTHER F-BOX/LRR-REPEAT PROTEIN 3 1 610 - -
Pvu10g0648 667 SMART LRR_CC_2 255 280 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 562 586 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 306 330 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 409 433 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 152 176 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 434 458 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 73 97 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 383 408 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 177 202 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 485 510 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 126 151 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 536 561 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 357 382 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 203 227 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 511 535 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 100 125 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 331 356 IPR006553 -
Pvu10g0648 667 SMART LRR_CC_2 459 484 IPR006553 -
Pvu10g0648 667 SUPERFAMILY RNI-like 65 278 - -
Pvu10g0648 667 Gene3D Ribonuclease Inhibitor 401 654 IPR032675 -
Pvu10g0648 667 Pfam Leucine Rich repeat 562 584 IPR001611 GO:0005515
Pvu10g0648 667 Pfam Leucine Rich repeat 359 380 IPR001611 GO:0005515
Pvu10g0648 667 Pfam Leucine Rich repeat 408 431 IPR001611 GO:0005515
Pvu10g0648 667 Pfam Leucine Rich repeat 255 277 IPR001611 GO:0005515
Pvu10g0648 667 Gene3D Ribonuclease Inhibitor 10 285 IPR032675 -
Pvu10g0648 667 SUPERFAMILY RNI-like 459 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0648 Pvu-Chr10 11094753 11099692 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0648 K10268 - gmx:100812083 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0648 10 11094753 11099692 Pvu8g1540 8 30392173 30393979 PCT