Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0647 ATGGGAATGTGGGAATTCTCTGTTGCTTTATACATGATCAATATTTGGCCAGAGTCCTTGCTGTATGCAGCAATATATGGTGCCTCTGATTCTGCCTCCATTGCAGTGTTTGGTCCCATAATTGGAAGATGGGTTGATAAGTTGTCATGCCTTAAGGTTTTACAATTATGGTTGGTGACACAAAATCTCTCTTTTGTTATTGCTGGGGCCTCTGTAGTTACCTTACTCATCCACTCATCTTTAAAGTTTACACATTTCTCCATTTTCATGTTGCTCATGTTGCTAATCAATGTCTGTGGTGGCATTGGTGTGCTTTCAACTCTTGCCGGTACAATCATGATTGAAAGAGAATGGTTGTTAGTTATATCTGAAGGTCAACCCCAAGAATTTCTTACAAGGATGAATTCAGTTACAAGACGAATTGATCTATGTTGCAAACTTCTTGCTCCTGTCGTAACAGGGTTCATAGTAAGCTTTGTATCACTAAAAGCATCTGCTATAACTTTGGCACTGTGGAATACTGTCTCTGTTTGGGTTGAGTATTGGCTTTTCACATCTGTATATCATGGGATTCCAGCTTTGGACCAAAGTAGCCAGAGAAGGATGGCAAGACTTTTACAGTGTGATCAGGAAATGAACACCTTAACTTCAGAGGAAGATAGCTTGCTTCCTGTTACTGGATGTAGCTCAGAATTGGCAGATAGAAAATGGAATAAAAAAATTTCTGAGAAGATTTCAGAGATTCCTTACATTGCTGCATGGAGAGTTTACTTACAGCAAGAAGTTGCTCTTCCAGGACTAGCTCTGGCTTCGCTATTTTTCACAGTACTAAGTTTTGGAACTTTGATGACAGCTACCTTAGAATGGAAAGGAATACCTACATATGTTATTGGACTAGGAAGAGGAATAAGTGCTGTGATTGGAATAGCTGCAACAGTTGCATACCCTGTGCTACAGTCTCGTATATCAACAATTAGAACTGGACTTTGGTCTATATGGTCTCAGTGGACTTGCCTCCTTCCATGTATAGCTTCAATATGGATCCAAAGTGGCTTTCTATCATCGTATATTCTGATGGGAAGTGTAGCCATTTCTCGGCTTGGATTGTGGATGTTTGATTTGTCAGTACTTCAACACATGCAGGATCTTGTCACTGAATCCGATCGTTTGATTGTTGGAGGTGTTCAAAATTCACTTCAGTCTTTGATGGAATTATTGGTCTATGTTATGGGAATCATAATATCTGATCCAAGGGATTTCTGGAAGTTGGCTGTAATATCTTTTGAAGCAGTCACATTAGCTGCGTTCCTCTTCTGTATCCATGCATACCATCGTCTGGGCCGAGCTCACGACCCGTCTTTTGGGCTCATACTCGTGCAAAACTGA 1386 0.4048 MGMWEFSVALYMINIWPESLLYAAIYGASDSASIAVFGPIIGRWVDKLSCLKVLQLWLVTQNLSFVIAGASVVTLLIHSSLKFTHFSIFMLLMLLINVCGGIGVLSTLAGTIMIEREWLLVISEGQPQEFLTRMNSVTRRIDLCCKLLAPVVTGFIVSFVSLKASAITLALWNTVSVWVEYWLFTSVYHGIPALDQSSQRRMARLLQCDQEMNTLTSEEDSLLPVTGCSSELADRKWNKKISEKISEIPYIAAWRVYLQQEVALPGLALASLFFTVLSFGTLMTATLEWKGIPTYVIGLGRGISAVIGIAATVAYPVLQSRISTIRTGLWSIWSQWTCLLPCIASIWIQSGFLSSYILMGSVAISRLGLWMFDLSVLQHMQDLVTESDRLIVGGVQNSLQSLMELLVYVMGIIISDPRDFWKLAVISFEAVTLAAFLFCIHAYHRLGRAHDPSFGLILVQN* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0647 461 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 1 3 444 - -
Pvu10g0647 461 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 3 444 IPR009716 GO:0005381|GO:0016021|GO:0034755
Pvu10g0647 461 CDD MFS_SLC40A1_like 1 441 IPR009716 GO:0005381|GO:0016021|GO:0034755
Pvu10g0647 461 Gene3D MFS general substrate transporter like domains 1 442 IPR036259 -
Pvu10g0647 461 SUPERFAMILY MFS general substrate transporter 3 445 IPR036259 -
Pvu10g0647 461 Pfam Ferroportin1 (FPN1) 3 431 IPR009716 GO:0005381|GO:0016021|GO:0034755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0647 Pvu-Chr10 10965218 10972625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0647 4 444 Organic Solute Cotransporters AT2G38460 58.691 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0647 K14685 - gmx:100813172 757.288