Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0644 ATGGAGAGTTCCGTTGGGGGGGAAAGGAGTAGTCGCGTGCCCCTGTCCGAGGTGGTGGCAGATTGTGTGAAGCGGTGGTTCAGAGATGCTCTGAAAGAGGCTAAGGCAGGGGACATAAACATGCAAGTGTTGGTGGGTCAGATGTACTACAGTGGCTATGGGGTTCCCAGAGATGCTCAGAAGGGAAGAGTTTGGCTGACCAAAGCATCAAGAACTAGATCTTCGGTTTGGAAAGTAGGTGATAAGCACCCAGGTTATAATGCCAGTGACTCTGATTCCGATGAATTGAAGGAGGATTCTTAA 303 0.4983 MESSVGGERSSRVPLSEVVADCVKRWFRDALKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRVWLTKASRTRSSVWKVGDKHPGYNASDSDSDELKEDS* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0644 100 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 100 - -
Pvu10g0644 100 SUPERFAMILY HCP-like 26 70 - -
Pvu10g0644 100 PANTHER EXPRESSED PROTEIN 1 100 - -
Pvu10g0644 100 Gene3D Tetratricopeptide repeat domain 20 86 IPR011990 GO:0005515
Pvu10g0644 100 SMART sel1 39 74 IPR006597 -
Pvu10g0644 100 MobiDBLite consensus disorder prediction 78 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0644 Pvu-Chr10 10831011 10838175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0644 - - gmx:100527831 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0918 8 9187222 9190046 Pvu10g0644 10 10831011 10838175 PCT