Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0643 ATGCCGCTCTCGAAGTACCGCGTGCGGAACGAGTACAGCTTGGCGGATCCCGAGCTGTATCGTGCCGCCGACAAAGATGATCCAGAAGCGCTTCTCGAAGCCGTCGCCATGGCCGGTCTCGTTGGACTCTTGCGCCAGCTCGGCGACCTCGCCGAGTTTGCTGCTGAGATTTTCCATGATTTACATGAAGAAGTAATGGTTACTGCTGCAAGAGGCCATGGTCTTATGGCTCGTGTTAAACAACTTGAGGCTGAAGTTCCTTCACTTGAGAAGGCTTTCTTCTCTCAAACTCATCACTCATCATTCTATACTAACGGAGGGATTGATTGGCATCCTAATCTACAGTCTGAACAAAATCTTGTGACTCGTGGAGACTTACCTCGATTTATAATGGATTCATATGAAGAATGTCGGGGCCCTCCAAGACTGTTCCTTCTGGATAAGTTCGATGTAGCTGGGGCTGGGGCATGCCTTAAGCGTTATACTGATCCATCATTCTTTAAAATAGAATCAACTTCTCCTGTAAATGCTACCATAGAAGTTCAGAGAGAGAAGAGAATTCGTAAAATCAAGCTGAAGAAAGGAGCAAGGCTGAGGGATGGTGAAGCTCCTAATGTTGTACCATCACATTCAAAATTACACCAGCTGCTTCTTGAAGAGCGTATTGAAAATGGTTATAGTAATCCTGCACGTCTAGTGAAGTTGAAAAAAAGACAACTGAATGGACCGGCAGTTGAAGCAGATGTTGGTAAGAGTTACATGGAGAAATTTCTGGAAACTCGTTCACCTGATCAAAAAATGGTTTGTGAAACTTCAATCTTTCCACTGCCTGTGAAATTGACATCAGATGATACTAGTGAGACTGGGATTAAAATTCTTGAAATTAGTAGCATCAGTCCTGTGAAAAGGTCAAAAGGAAATAAAAACACCTATTCATCCCTTGATGAGCAGGACTTAGAACTAAAATCATTTTCAGAAATGAATGGTGGGACTGATGGAGATCCTGTGAAGGTGAAAGAAGAAATCTCATCTGGTGTGACACTTCATATATCTTCTAATAATCGGAAGTTGCTTGATGTAGCACAATTGGCTATTGATGAACGAAGGAAAATAGAAGGCAACTTAGATGGGTACCATTCAGATGACGTGACTAGTGAGGTTGACAATTACATGGATGCTTTAACTACCATGGAATCAGAATTGGATACAGACAACGAGTACAAACCTAAGAATAGATTCTTGAATGTTCAAAAGGAAACAAATACTAAGGATAAAGAAGAACGACAACTACAAGCTCATTTTTCAGATTCTCAATCATTTGGGGAGTCTTCAATGTCTGATGACAGTAGTTCTTTCAAACAAGATAGAAATGAAGAACTTATTAAAGTGCAAGCTAAGTCTTCAGATTCTCAATCAACTGGAACCTCCTCTTCATTAGATGATAATAGTTCACTCAGAAGAGATATAAATGGGCAGCATATAGAACTACAAGCTCACCTCTCAGATTATCGATCTGTTGGAAACTCCTCTACATCAGACAAACATGTTTCTTTCATGAAAAATAGATCCTATTTACCTCAGTCTGATTCATCAAGCACCGTCATTGAAAACACACCAGAACCTTCATTATTCACAAATGCTAAGTATTATGGACCGGTGGTTGCAGATGTGCCATCCAACCAGCTTCCCCAAAATGTTGAGTTCCAACACACAGATTGTAGGAGGTCTGTCATGCATGATGATGCTGCTGTTCATGAAGAAGAGATTTCTGATTCCAGGCAAGCCTGTTCAGATAGGACGACTTCAGGACAGTGGTTGTGTTCAGATACTGGATACACCTCACAAGTGGTCATACCTGCAGGGACTGAATCAGGTGAAACCTCATCTGATCCTGTTGAACTTAAGTTAAGGTTAGATGGTGATGATGCAGACAAAACTCAAGAAGATGATGCAGGCAGAACAGGAGATGATGATGATGATGATGCAGGTAGAACAGGAGATGATGATGCAGACAGAAAAGGGCTTGCAGAATCTATTACTTCCAAACCTGTCTCTCTCTCCCTCATAAAAGATAATGCTTGTCCTATGAATTCTTCTGATAAAACATCAATAGACAACTTGGATGATGATAATCCATGTATTCACTCTGATGATTTGTTACAAGTTTCTAATGATTTGGGATTTGCTCATGGAGATGAATCCAATTCTCATTCTGAAATCAAAATGTTCCAAGCAGGACCTACAGATGAAAACATTTCTGAAATTTTGGCTAATAGAGATATTGATTCACCAGGTGAGGATCCTGTTTGCCTGTCCACCAAAGAATTAAAAGTGAATTCAGGTGCTGTGCTGGCTCCTGAATTTCATGACACAAAAGATCAAGGTTCTACTACAGCAACCCAGCTTAATACAGAGACTGTTGTGAAGGTTCCTTCAATGAGTTGCTTTACTGGGGTTCTTTCCTCTGACTCAATTCAAAACAAAACACAGGAGGAACCAGGCTCAGAAGAAATTGAAGTTTCAAATCCTGATCTGGCATCAGAAGTTGACGAGGTACCGAAGATGGTGCATGATGATGAAACAAACGGATCCACCTGCAGTGTTGATCCAGTTGAAGTTGATAGTCGTTTTAAACATCCATCTTCTGATAATCATGTGATGGTAAATGATCTGGTCACTGAAAATGTTCAGTCAGAAGATCAACGTGTATATTCTGTCCCATGTGTTTATAGTGCTGAAAATGGTGTGGGTGTCATTACTAGTCTAGTTTCCAATCAGACTTCTCCTTCAAGGGGTTCTTCAGATTCAGAAGAGCCTCTGTTGAATACGCATTCTTATAAAATGGACTTGAAATCCAATGAAGTAGAATTGATGCAAAGTGCCATGGACACAAATGCAGAGGCGAATGAGAATCAATTGGCACCTTTGCTAGATTTAACATCATCTGATGTAATAAATTCTGCAACCGGTAATATTGCGAAGTTAGAAGAATCTCTTCCTATTTTTGCAGATTCACAGGAGAGGGAAGTTGACGAGGCAGTTTCCAGAGAATCTACAGAACTAGAGGACCAGAAGATAGTGGATCAACCAGAAATTGCTTCTATGGATGCAAAATTGAACCTGAACAAAATTGTTCCTTGTGATCTTTCTGATTCTGGAACATGTAATATTCAGAAGTTCCAACATAGTGCTTTTGTTGATGATGCTGAAACAGTGCCTGAATTTTCAGGGTTGGATGCCCAGCAGTCAGAATCAATATTTAATGGTCAGCATGATCCACTACAAAATGGCAGAGATAGTTTTTCATCACCTTCGGGGAATCAGTGGGGACCTGAAGCTGATTTAGATCTGTTCTCAAAATCCCAAATTGGTGAACTGGTTGAAGAATATCCACTCAGAGATGAAAGAAACTTTGCCTCTGAGAAATCTCAATATCAGAAGATGCAATATCTATTGGAGCAAGAAAGCAATCATGCTACTTCTGAATATGTGTCAGAAATACACGCAGATGAGCCATCACCATTTTATTCCTTGCCACATTCATCTAGTCAGAATGCTGCAAAACTTGTCATGGATCCATTGATGCCTCTTCTTCCTAGCCACTTTCCCAAGGCAACTCAAAATAATCTTGATGAGATGCCACCTTTGCCTCCTCTACCGCCTATGCAATGGAGAATGGGAAAGGTTCAAAATGCTTCCCTACCTTCACATAGAGAAGAATTAGAAGTAAGTCAGGCTTCAGTCCAGCCAATTAGGCTGGATAAAACATCTCTATTTGGTGTGCCAATTTCTGAGAGAGAGACCTCGTTGTATCAGCATCCATTTTTGCCTGTCATGGCTGTGGAAAGTGATAAGCTCGAACATTCTTCTGGGTTTCCTGTTGGTGTTTCAGGGCATCCTGTTGCTATTCCTTTTCAATTTCCTATCATGGTTAATGAATCAAAAGGTCAATATAATTACCTATTTCTGGAGAGAAACCAAATTCCGAATCCCTTCTTATCCTTACCTGTGGCATCTACAGGCATGTCTCCTCATGGTCTCATTGTTGCTCCTGAGGGAAAAGTGATGCAGAATTCAAACCCATTTGTGCCTGTACCAGCAGCTGCATATGCTGTTTCAGTGCATGATTCCATCCCTACAGAAGAAAGTTCAACTCAACCTCCACATAAGTTAATGTTGGAGACTAGATCCGATGATAAATCACTTCAACAGAGTATGACTAATATGGTATCTATGGACGGGCCTCCAAATGGTCACGCAATTGATTCTGGGGGAGAAATTGTACTGAATTCAAACCCTTGCCCTACAATTCCACCTGCTGAATGTGCTCTTTCTGGACAGGATTTCGTTTCAGCTGAAGAAAAACTGCCTCAGCCTCCAAGTCAATTAATGATGGAGCCTAGTTCAGATGATAAAACACTTAAGCAGTCTGTTACTGATGGGGTACCAATGGACAGTCCTGACATTCACATTGTTGCTTCCGATGGAGAAATGGAACAAAGTTCTAACCCAGAGCCTCCAATTCCACCTGTTGAATGTGCTGTTCCCGGGCCTGGACATGATTCTATCATTTCTGAAGGAAAACTGACTCTACCTCCAAGTCAATTAATGTCAGGGACTAGTTCTGAAGTTCAAACCCTGCAGCAGTCTATGCATAATTTGGAAGGGGAACAAGAATGTTTGCCTATCTCATTCATGTCTGCAAACATGGAAAGTATGGAGCCTAATCAGAGTTTCGCAACCAATGAAGGGGGAATGACAATGTCCTTGGATACATCTGATCATACTTCAGACGTGGAGAGTGAAAGAACTAATGGAAAACCAAAGAGTAAGCTTCTTCGTCCTCGAAATCCTCTAATAGATGCTGTTGCTGCTCATGACAAAAGCAAGCTTAGGAGGGTTACCGAACGGGTCATGCCTCAAATTGCACCGAAGGTAGATGAAAGAGATTCTCTACTAGAACAGATAAGAACAAAGTCCTTCAACTTGAAGCCTGCTGTGACTACGCGACCTAGCATTCAAGGTCCAAAAACAAATTTGAAGCTTGCAGCCATCTTGGAGAAAGCAAACGCAATTCGCCAGGCTTTGGCTGGAAGTGATGAAGATGACGATGCGGATTGGAGCGATTCTTGA 5133 0.4136 MPLSKYRVRNEYSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMVTAARGHGLMARVKQLEAEVPSLEKAFFSQTHHSSFYTNGGIDWHPNLQSEQNLVTRGDLPRFIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKIESTSPVNATIEVQREKRIRKIKLKKGARLRDGEAPNVVPSHSKLHQLLLEERIENGYSNPARLVKLKKRQLNGPAVEADVGKSYMEKFLETRSPDQKMVCETSIFPLPVKLTSDDTSETGIKILEISSISPVKRSKGNKNTYSSLDEQDLELKSFSEMNGGTDGDPVKVKEEISSGVTLHISSNNRKLLDVAQLAIDERRKIEGNLDGYHSDDVTSEVDNYMDALTTMESELDTDNEYKPKNRFLNVQKETNTKDKEERQLQAHFSDSQSFGESSMSDDSSSFKQDRNEELIKVQAKSSDSQSTGTSSSLDDNSSLRRDINGQHIELQAHLSDYRSVGNSSTSDKHVSFMKNRSYLPQSDSSSTVIENTPEPSLFTNAKYYGPVVADVPSNQLPQNVEFQHTDCRRSVMHDDAAVHEEEISDSRQACSDRTTSGQWLCSDTGYTSQVVIPAGTESGETSSDPVELKLRLDGDDADKTQEDDAGRTGDDDDDDAGRTGDDDADRKGLAESITSKPVSLSLIKDNACPMNSSDKTSIDNLDDDNPCIHSDDLLQVSNDLGFAHGDESNSHSEIKMFQAGPTDENISEILANRDIDSPGEDPVCLSTKELKVNSGAVLAPEFHDTKDQGSTTATQLNTETVVKVPSMSCFTGVLSSDSIQNKTQEEPGSEEIEVSNPDLASEVDEVPKMVHDDETNGSTCSVDPVEVDSRFKHPSSDNHVMVNDLVTENVQSEDQRVYSVPCVYSAENGVGVITSLVSNQTSPSRGSSDSEEPLLNTHSYKMDLKSNEVELMQSAMDTNAEANENQLAPLLDLTSSDVINSATGNIAKLEESLPIFADSQEREVDEAVSRESTELEDQKIVDQPEIASMDAKLNLNKIVPCDLSDSGTCNIQKFQHSAFVDDAETVPEFSGLDAQQSESIFNGQHDPLQNGRDSFSSPSGNQWGPEADLDLFSKSQIGELVEEYPLRDERNFASEKSQYQKMQYLLEQESNHATSEYVSEIHADEPSPFYSLPHSSSQNAAKLVMDPLMPLLPSHFPKATQNNLDEMPPLPPLPPMQWRMGKVQNASLPSHREELEVSQASVQPIRLDKTSLFGVPISERETSLYQHPFLPVMAVESDKLEHSSGFPVGVSGHPVAIPFQFPIMVNESKGQYNYLFLERNQIPNPFLSLPVASTGMSPHGLIVAPEGKVMQNSNPFVPVPAAAYAVSVHDSIPTEESSTQPPHKLMLETRSDDKSLQQSMTNMVSMDGPPNGHAIDSGGEIVLNSNPCPTIPPAECALSGQDFVSAEEKLPQPPSQLMMEPSSDDKTLKQSVTDGVPMDSPDIHIVASDGEMEQSSNPEPPIPPVECAVPGPGHDSIISEGKLTLPPSQLMSGTSSEVQTLQQSMHNLEGEQECLPISFMSANMESMEPNQSFATNEGGMTMSLDTSDHTSDVESERTNGKPKSKLLRPRNPLIDAVAAHDKSKLRRVTERVMPQIAPKVDERDSLLEQIRTKSFNLKPAVTTRPSIQGPKTNLKLAAILEKANAIRQALAGSDEDDDADWSDS* 1711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0643 1710 MobiDBLite consensus disorder prediction 1586 1613 - -
Pvu10g0643 1710 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 554 645 - -
Pvu10g0643 1710 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 667 1396 - -
Pvu10g0643 1710 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1410 1710 - -
Pvu10g0643 1710 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 517 - -
Pvu10g0643 1710 MobiDBLite consensus disorder prediction 1456 1485 - -
Pvu10g0643 1710 MobiDBLite consensus disorder prediction 1462 1480 - -
Pvu10g0643 1710 MobiDBLite consensus disorder prediction 637 676 - -
Pvu10g0643 1710 MobiDBLite consensus disorder prediction 415 432 - -
Pvu10g0643 1710 MobiDBLite consensus disorder prediction 637 678 - -
Pvu10g0643 1710 MobiDBLite consensus disorder prediction 1595 1609 - -
Pvu10g0643 1710 MobiDBLite consensus disorder prediction 824 846 - -
Pvu10g0643 1710 Gene3D - 1598 1709 - -
Pvu10g0643 1710 Gene3D - 103 209 - -
Pvu10g0643 1710 MobiDBLite consensus disorder prediction 449 463 - -
Pvu10g0643 1710 MobiDBLite consensus disorder prediction 464 485 - -
Pvu10g0643 1710 ProSiteProfiles WH2 domain profile. 1648 1666 IPR003124 GO:0003779
Pvu10g0643 1710 MobiDBLite consensus disorder prediction 433 448 - -
Pvu10g0643 1710 Gene3D - 1 90 - -
Pvu10g0643 1710 MobiDBLite consensus disorder prediction 1088 1109 - -
Pvu10g0643 1710 PANTHER WASP-1 554 645 IPR028288 GO:0005856|GO:0030036
Pvu10g0643 1710 PANTHER WASP-1 1410 1710 IPR028288 GO:0005856|GO:0030036
Pvu10g0643 1710 PANTHER WASP-1 1 517 IPR028288 GO:0005856|GO:0030036
Pvu10g0643 1710 PANTHER WASP-1 667 1396 IPR028288 GO:0005856|GO:0030036
Pvu10g0643 1710 MobiDBLite consensus disorder prediction 415 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0643 Pvu-Chr10 10789999 10797935 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0643 - - var:108347390 2631.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0917 8 9171460 9178294 Pvu10g0643 10 10789999 10797935 PCT