Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0627 ATGAGTGAACTTCTTTTTGATGACATTTTCAAGGTTGACGATATAGACCCTGATGGTAAAAAGTATGACAAGGTCTCTCGGATTGTGGCACAGAGTGAGAAGCGTGACATGTACATGCTTCTAGATGTAAATACAGAAATTTATCCGATAAGGAAAAAAGAAAGATTCTTGATGGCTTTGTCTCCTTCACTTGTTTTGAATACTAAGGATGGCCAAGTGTCAATTCAAGACAAGTTTGAATACATCATGCACGGAAGGTTATACAACATTACCAACGAGGGATGTTCAAAACCTCAGCATGAAGTGGAGGTATATGCTTCGTTTGGTGGGCTTCAGTTGATGCTGAGAGGACATGCTTCCCATTGTGTTAAGTTTGCTGTTGATCAGAAGTTGTTTTTATTATTAAGGAAGGTTGAAAGTTGA 423 0.3853 MSELLFDDIFKVDDIDPDGKKYDKVSRIVAQSEKRDMYMLLDVNTEIYPIRKKERFLMALSPSLVLNTKDGQVSIQDKFEYIMHGRLYNITNEGCSKPQHEVEVYASFGGLQLMLRGHASHCVKFAVDQKLFLLLRKVES* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0627 140 PANTHER DNA-DIRECTED RNA POLYMERASE I, II 1 138 - -
Pvu10g0627 140 SUPERFAMILY Nucleic acid-binding proteins 3 137 IPR012340 -
Pvu10g0627 140 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3 1 138 IPR005570 GO:0006351
Pvu10g0627 140 PIRSF RPB8 1 139 IPR005570 GO:0006351
Pvu10g0627 140 Gene3D - 6 139 IPR012340 -
Pvu10g0627 140 Pfam RNA polymerase Rpb8 7 137 IPR005570 GO:0006351
Pvu10g0627 140 SMART rpol8neu 2 137 IPR005570 GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0627 Pvu-Chr10 9909695 9913441 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0627 K03016 - gmx:100780342 233.802