Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0622 ATGGGTAGATTAAGAAAATTGCAAAAAACAGAAGGACAAAGGAGAAGTCCACGGTTATCTACACTAGAGATTGAGTCTCATGATCATTTATTGAGACAACATTTAGATAGTGATCAAGGACCTGCATTTCGAACAAGGGGTAGAAAGAACACAAAATTGAGGCTACTCCAACAACTCAAACCATCAACAAATCAACCATCAAAATTGGCATCTTCAAGTTTTTTGCCTGAGACGCGAATACTTCAACTTGTACTTGACACTTTACAAAGGAAAGACACCTATGAAATATTTGTTGAACCAGTTGATCCAAATGAGGTTGAAGATTATTATGCTATCATAGAAGAACCTATGGATTTTGGCACCATTAGGGCTAAACTACATGAGAGGATGTACAAGACTCTAGAACAATTTGAGCATGATGTTTTCCTAATATTTGGCAATGCAATGCGTTTTAATTCTTCAGGTACCATATATTTTAGGCAGGCTCGTGTTATAAATGAGCTAGCTAAGAAAGTTTTTGATATATTAAGGAAGAATCCTGAGAAGTTTGAAATGGAATATTCTGAACCAAAGCGAAAAACAGGTCGGAGTAATCAAAAGGATTTTAGGAATTCAAGAAACTTGAAATCCAATGAAATAAATATTAGTGTGCCCTCAAAAACTATGTTGTGTTCGGCTCGTAGTACATTAAATAAAAGAAGTTGTAAGACAAATCATCTTGATGCCAAAAATGTTGTGATTACTACAGGTACTAAGGAGTGTAACAAATGCAAGTCTTTAGAGACTGATAGGCGTGACACATATAAACCATTGCACTTTGACAAGGACAACTCTACACTGCCAATAATAAATGGTCAACTAAAACTCCTTCAACATGTTGATCAACAAGATAATGACTATAAAGATAGTTTGATGTTGTTTGCCAAAGATTTAGGACCTATTGCCCAAAATATAGCCAAAAGGAAATTTCTTGGATGTAAAATTCTCACGGCAACTACTTCCATTCCATACAAAACAGAAAATGATACTTTCAATATAATTGGTGGAAGGGAAGCAGTTAAAGGGATATTGAATGTTCTAAACAAGAAAGGTTGCAATCCTTTAAACGGTAAGATTTGGGGATATCACAAGTGGCCCGTAAGGTGTGATAAAGAGTTCTTAAGCAAGAGATTTTGTTTTGAGCCACGTTATTCATGA 1197 0.3517 MGRLRKLQKTEGQRRSPRLSTLEIESHDHLLRQHLDSDQGPAFRTRGRKNTKLRLLQQLKPSTNQPSKLASSSFLPETRILQLVLDTLQRKDTYEIFVEPVDPNEVEDYYAIIEEPMDFGTIRAKLHERMYKTLEQFEHDVFLIFGNAMRFNSSGTIYFRQARVINELAKKVFDILRKNPEKFEMEYSEPKRKTGRSNQKDFRNSRNLKSNEINISVPSKTMLCSARSTLNKRSCKTNHLDAKNVVITTGTKECNKCKSLETDRRDTYKPLHFDKDNSTLPIINGQLKLLQHVDQQDNDYKDSLMLFAKDLGPIAQNIAKRKFLGCKILTATTSIPYKTENDTFNIIGGREAVKGILNVLNKKGCNPLNGKIWGYHKWPVRCDKEFLSKRFCFEPRYS* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0622 398 PANTHER BROMODOMAIN CONTAINING PROTEIN 6 339 - -
Pvu10g0622 398 SMART bromo_6 70 178 IPR001487 GO:0005515
Pvu10g0622 398 SUPERFAMILY Bromodomain 63 185 IPR036427 GO:0005515
Pvu10g0622 398 CDD Bromodomain 77 173 - -
Pvu10g0622 398 PRINTS Bromodomain signature 92 105 IPR001487 GO:0005515
Pvu10g0622 398 PRINTS Bromodomain signature 106 122 IPR001487 GO:0005515
Pvu10g0622 398 PRINTS Bromodomain signature 122 140 IPR001487 GO:0005515
Pvu10g0622 398 PRINTS Bromodomain signature 140 159 IPR001487 GO:0005515
Pvu10g0622 398 PANTHER BROMODOMAIN CONTAINING PROTEIN, EXPRESSED 6 339 - -
Pvu10g0622 398 Pfam Bromodomain 84 163 IPR001487 GO:0005515
Pvu10g0622 398 ProSiteProfiles Bromodomain profile. 89 159 IPR001487 GO:0005515
Pvu10g0622 398 MobiDBLite consensus disorder prediction 186 207 - -
Pvu10g0622 398 MobiDBLite consensus disorder prediction 186 208 - -
Pvu10g0622 398 Gene3D - 72 197 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0622 Pvu-Chr10 9880647 9883146 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0622 K22184 - gmx:102667935 489.574