Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0609 ATGGCTGAGAGAGCAGTGAGAGAGTTGTTGAGGGTGGTGATGGTGTTGATGTTACTGATGTTGGCACCAAAGACAAAGGCAATGAGCAGCAGAAGGGGCCAAAAAAGGGGTAAAGATGAGTCATCTGGGTCTGGTGAAGGGGATGCAATGAGCTTTTGTTTGAGTTGGAGATTGGCAGTGGAGGCAAACAATGTGGTTGCATGGCCAACAGTGCCACCTCAGTGTTCCCGATATGTGGAGACTTACATGATGAATGGACAGTACGAACGGGACCTGGATTTGATAGTGGAGGAAATATTGGGATATGTCAACCAAACATTGCTCCCTCCAGATGCCATGGATGCTTGGATTTTGGATGTTGATGACACTTGCATCTCCAACATCTACTATTACAAAAGCAAGAACTATGGGTGTGATCCATATGACCCATCTGCCTTTAGGAAGTGGGCCAAGATAGGAGGGTGCCCTGCAATTCCTTCTGTACTAAGGTTATTTAGCATTTTAGTAGACAAAGGGTTCAAAGTATTTTTACTCACTGGAAGAGATGAAGAGACTCTTGGTGAAGTTACCAAGAACAACTTGCACAATCAAGGATTTATTGGCTATGAACGGCTTGTTTTGAGGAATGCAGCATACAAAGGGAAAAGTGCAATGAAATACAAATCTGATGTGAGAAAGCAGTTAGAAGAGGAAGGTTACAGGATATGGGGGAATGTGGGAGACCAGTGGAGTGATATTAAGGGAGATTATTTGGGGAACAGAACTTTCAAGCTACCAAATCCCATGTACTTTGTTCCCTAA 801 0.4382 MAERAVRELLRVVMVLMLLMLAPKTKAMSSRRGQKRGKDESSGSGEGDAMSFCLSWRLAVEANNVVAWPTVPPQCSRYVETYMMNGQYERDLDLIVEEILGYVNQTLLPPDAMDAWILDVDDTCISNIYYYKSKNYGCDPYDPSAFRKWAKIGGCPAIPSVLRLFSILVDKGFKVFLLTGRDEETLGEVTKNNLHNQGFIGYERLVLRNAAYKGKSAMKYKSDVRKQLEEEGYRIWGNVGDQWSDIKGDYLGNRTFKLPNPMYFVP* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0609 266 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 47 265 IPR005519 -
Pvu10g0609 266 TIGRFAM plant-AP: plant acid phosphatase 49 266 IPR010028 GO:0003993
Pvu10g0609 266 CDD HAD_VSP 79 265 - -
Pvu10g0609 266 PANTHER HAD SUPERFAMILY, SUBFAMILY IIIB ACID PHOSPHATASE 12 266 - -
Pvu10g0609 266 SUPERFAMILY HAD-like 99 263 IPR036412 -
Pvu10g0609 266 PIRSF VSP 2 266 IPR014403 -
Pvu10g0609 266 Gene3D - 49 266 IPR023214 -
Pvu10g0609 266 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 12 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0609 Pvu-Chr10 9722371 9724509 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0609 - - gmx:100777758 444.506