Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0597 ATGGAGCCTTCACTCATACTCTCTCCACCTTCATCGTCCACCCCTTTACCTTTCTTCATCTCAAACGCACTTCCTTTCCATGCAAAACCCAATCTTTCCGTCAAACTCAATTGCACCCTCCAAAAGTCCCATTTTTGGGGAAGAAATTTGAGTTGGGTCCCATCACAATTGCCGCATGGGAGATCGAAATTTGATGCGATGAGGCCCATAATAACAGCGGCGGTGAAGAGAAGGAAAGAGCTTCCGTTTGACAACGTGATTCAGAGGGACAAGAAGCTGAAATTCGTTCTGAGGGTGAGGAGTATTCTGGTGGCTCAACCAGATAGGGTTATGTCGCTTAAGCAGCTTGGCAAGTTCAAAAGAGATTTGGGTCTTGATAAAAGGAGGAAACTTATTGCCATATTGAAGAAATTCCCAGCTGTGTTTCAGATTATGGAAGAAGGGGTTTACTCTCTTAAGTTCAAAATGACCCCTGAAGCTGAGAGACTCTATTTTGAGGAATTGAAGATTAGGAATGAGATGGAAGAGTTGGTGATTGTCAAGCTCAGGAAGTTGTTGATGATGTCTCTGGAAAAGCGGATTTTGTTGGAGAAAATTGCACATCTCAGGACTGATTTTGGTCTCCCGCAAGGATTTCGGGACACCATTTGTCATAGGTACCCTCAGTACTTCAAAGTGGTTGCCACTGAGCGTGGCCCTGCCTTGGAACTAACTCATTGGGACCCTGAGCTTGCAGTTTCAGCGGCTGAGCTATCGGCTGAGGATAATCGTATCAGGGAAATGGAGGAGCAGAATTTGATCATAGACAGACCTCTCAAGTTCCACAGGGTGAAGCTTCCTAAGGGTCTTAATCTTTCCAAGGGTGAGATGAGGAAGATCATGCAATTCAGAGACTTGCCTTATATGTCGCCTTACTCTGATTTCACAGGACTGAGGCCAGGGACAAGGGAGAAGGAAAAACATGCTTGTGCAGTTGTTCATGAGATTCTGAGTCTCACACTTGAGAAGCGGACGCTTGTTGATCACTTCACACACTTTCGCGAGGAGTTCAGATTCTCTCAGCAGCTGAGGGGGATGTTGATAAGGCATCCTGATATGTTTTATGTCTCTCTGAAAGGAGACAGGGATTCTGTGTTTCTCAGGGAAGCTTACCGGGACTCTCAGTTGGTGGACAAGGACCGATTGTTGCTTGTAAAGGAAAAGTTTCGTGTCCTGGTTAATGTTCCGCGATTCCCCAAGGGACCTGCTCGCAGGACGCTTGAAGATAGCTTGAGAGAAGGTGATGGCAGAGAAGATGAAAGTGATCAAGGGGAAGAAGCATGGTCAGAAGAAGTTGATAATTTGGTCAGTGACGAAGAATTTGAGGATGGTGATGATGGCTGGAGTGATGACGACGATGACAGTTTGCCACCAGATTTTGATGACGAAGCTGAAATATTGGAGATTGGACAAGGAAAGACAAATAAACAAGTTAAATACTCGAGACAGAATGATGAAGAGGTCCTTCTTCCTGTATTCTCTGACGGCCGTCCCAGAGAACAATGGTGA 1548 0.4561 MEPSLILSPPSSSTPLPFFISNALPFHAKPNLSVKLNCTLQKSHFWGRNLSWVPSQLPHGRSKFDAMRPIITAAVKRRKELPFDNVIQRDKKLKFVLRVRSILVAQPDRVMSLKQLGKFKRDLGLDKRRKLIAILKKFPAVFQIMEEGVYSLKFKMTPEAERLYFEELKIRNEMEELVIVKLRKLLMMSLEKRILLEKIAHLRTDFGLPQGFRDTICHRYPQYFKVVATERGPALELTHWDPELAVSAAELSAEDNRIREMEEQNLIIDRPLKFHRVKLPKGLNLSKGEMRKIMQFRDLPYMSPYSDFTGLRPGTREKEKHACAVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSQLVDKDRLLLVKEKFRVLVNVPRFPKGPARRTLEDSLREGDGREDESDQGEEAWSEEVDNLVSDEEFEDGDDGWSDDDDDSLPPDFDDEAEILEIGQGKTNKQVKYSRQNDEEVLLPVFSDGRPREQW* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0597 515 Coils Coil 244 264 - -
Pvu10g0597 515 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 12 467 IPR040293 GO:0000373|GO:0003723
Pvu10g0597 515 MobiDBLite consensus disorder prediction 416 431 - -
Pvu10g0597 515 Pfam Plant organelle RNA recognition domain 79 407 IPR021099 GO:0003723
Pvu10g0597 515 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 12 467 IPR045040 GO:0003723
Pvu10g0597 515 MobiDBLite consensus disorder prediction 416 498 - -
Pvu10g0597 515 MobiDBLite consensus disorder prediction 432 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0597 Pvu-Chr10 9612391 9613938 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0597 - - gmx:100810556 849.351