Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0588 ATGAAGACTCTTCTTCATTCCTTGCCATCCATGTCCAACTTTTCCTCCAACCAGATTCGCTTTCTCCTCACCACCTTGAACGAAGTCAACTTTGACTCCGTTTTCCATCAACTCTCTCAGTTTGCTGAATTTGGAACCACTGGATGCATTTTGCTGCTTCAAACTTGCTTGGATCACTATGGTTATGCCAGAAGAGATACGAAAGACATGCAGCATGAGCCAATTCTTGGGGCAGTCATTAAATACCTCTTGGACAAACCAAACTTCAGCACAGTGTTTTCTGAGTCCATGAAGAATATGGAAATTAATGAAAGCTTTCTAGAAATTTTTTGTAATGGATTGCAGTTATCTTTATTGGAAAAGATGGTCATCAGTCTTGCTTTATCTGATTCTGAGAATCCTGATGTCAGGCTGTGTGGAAAAAACTTTTGCATGTCTCAGATTGAGGAATTGTGTGCCAACCCTGGTTCTATGAGTTTTCATGAGCAAATTCACAGTATTATCATGTTCCTAAAGCAGTCCGAGGGTCTTTCCAAGCACGTGGATTCCTTTATGCAGATATTATCACTTGTGGAGTTCAAAGACACACCACCTTTCGTCTTGACTCCATTGCTTCCTGATGAGATGCATGAGGCTGATTTTTTAAGGAATATGGAGTTGTTCCACGACTCTGGAGAAAATGATTTTGATGCTATTTTGGCAGACATACAGAAGGAAATGAACATGGGTGATATTGTGAAGGAGCTAGGCTATGGATGCACTGTTGATGTTTCACAGTGCAAGGATATATTTTCACTCTTCTTACCTTTAACTGAACATACACTCTCTAAATTACTTGGTGCTATTGCTTGTACCCATACTGGGTTGGAGGACAACCAAAACACATACTTAAATTTTCGTGCGGCCCATGGATACAACGTGTCTGAGTTGCCGCCGCTGAACTCTTGGAATATTGATGTCTTGATTGATACAGTCAAGCATCTTGCACCTCATACCAATTGGGTACGTGTTATTGAAAATCTTGATCATGAAGGGTTTTTTCTTCCTAGTGAAGAGGCATTCTCTTTTCTCATGTCCGTATATAAACATGCCTGTAAGGAACCGTTTCCTCTCCATGCCATCTGTGGGTCTGTCTGGAAGAATACTGAGGGTCAGTTGTCGCTCCTTAAATATGCTGTATCAGCAGCACCGGAAATGTTTACCTTTTCACACTCTGGAAGACAGCTGGTATATGCTGATGCAATTAATGGCCACAAACTTCAAAATGGACATCCCAATCATTCATGGCTGTGTCTTGACCTTTTAGATGTCCTCTGCCAGCTAGCTGAAAAAGGTCATGCCAGTGTTGTTCGATCAATCCTTGATTATCCCCTTAAGCACTGTCCTGAAGTCTTGCTTCTTGGGATGGCACACATTAATACGGCCTACAATCTCTTGCAGCAGGAAGTATCTCTAATTGTTTTTCCCATGATTGTAAAAAGTGCTGTAGGCAGTGGGATGATTCTACACCTTTGGCATGTAAATCCTAACTTGGTCTTTAGAGGGATAATTGATTCTCAAAACCATGACTCAGACAGTATTATAAGAATTGTGGACATCTGCCAGGAGCTAAAGATTTTATCATCTGTGGTGGAAGTTATTCCTTCTCATTATAGTATAAGGTTAGCAGCTGTTGCATCAAGAAAAGAATTACTTGACTTTGAGAAGTGGTTGAGTAGCAACTTAATTACATACAAGGAAACCTTTTTTGAGGAGTGTCTCAAGTTCTTGAAGGATGCCCATTTTGGTGGATCACAGAACCTTTCTGGCCAATCTTTTCATCCATCTAGTGCTGTTCTGAGTCTATATGCTGAGACAACTGCTACTGTCTTGAAGGTTCTTAAATCTCATAATGACTTGGTTGCCCCTAGACATCTTTCTGAGGAGTTGGAGAGGCTGCATATATCTATTATAGATTCAAATCCAAGGATTCAGAATGGTGGAGCAGCTGATTCATCTACTTCTGATGGATATGCGGATGACATTGAAGCAGAAGCAAACTCTTACTTCCATCAAATGTTCTCTGATCAGTTAACCATTAATGCAATGGTACAAATGCTTGCTAGATTCAAGGAATCTTCAGTGAAGAGGGAGAAATCGATTTTTGATTGCATGATTGCAAACTTATTCGAGGAGTATAGATTTTTTCCAAAGTATCCTGAAAGGCAACTCAAAATAGCTGCAGTTCTCTTTGGTTCTGTGATCAAGCATCAGCTTGTAACTCATCTGTCTTTGGGGATTGCACTGCGTTATGTTCTTGATGCATTGCGCAAGCCTGCAGATTCAAAAATGTTTTTGTTTGGAAGTCTGGCATTGGAGCAGTTTGTGGATCGTCTAATTGAGTGGCCTCAGTATTGCAATCATATTCTTCAAATTTCCCATTTGCGCAGTACACATTCAGAAATAGTTGCTTTCATTGAGCAGGCCCTTGCTAGGATTTCTTCTGGTCATTCGGATGGTGATGGGGCAAGTCATGCTTCTGTTATTAGTAACCATCATTCTGCACCGGCTACATTAGGGCATGTAGAGCAGCTCAGTGGCCCCACAGTCATACAACCTGGGCAGCAACATTTGTCACTGCAGCTTCAACAGAGACGTGAAAATCTCTTGGATGATCGTCACAAAGCTTCTGTTGGTTCATCTACTGATGTCAAACCACAGTTATCTTCTCTAGGGCAATCTTCAGTACTAACACCTACTGATGCTTCTAATACCAATAAGTTGCATAGCTCAGTCAGCACCTCGTCAATGCTATCTTCTTCTCCTGGTTTTGTCCGCCCTTCCCGTGTCCCTACTTCTACCAGGTTTGGATCTGCCTTGAACATTGAAACTTTGGTTGCTGCTGCTGAGAAAAGAGAAATTCCTATTGAGGCTCCAGGGTCAGAAGTTCAGGACAAGATATTATTTATAATTAATAATGTTTCTGCTGCTAATATTGAAGCTAAATCAAAAGAGTTCACTGAAATTTTGAAAGAACAGTACTATCCTTGGTTTGCGCAGTATATGGTTATGAAAAGAGCAAGCATTGAACCAAATTTCCATGACCTGTACCTGAAATTCCTGGACAAAGTTAATTCAAAGGCTTTGAACAAAGAGATTGTTCAGGCAACTTATGAAAATTGCAAGGTTCTTTTAGGATCTGAACTCATAAAATCAAGTTCAGAGGAACGCTCTTTGCTTAAAAATTTGGGGAGCTGGCTTGGAAAGTTAACAATTGGCCGGAATCAGGTTTTGAGGGCTCGTGAAATAGACCCAAAGTCTTTGATTATGGAGGCATATGAGAAGGGGCTAATGATTGCTGTTATTCCATTTACATCAAAGGTCCTTGAACCATGCCAAAGCAGTCTTGCATACCAACCTCCTAATCCTTGGACTATGGGCATTTTGGGATTGCTTGTTGAAATTTATTCAATGCCAAACTTGAAAATGAACCTCAAGTTTGACATAGAGGTTTTATTCAAAAATCTTGGTGTTGATATGAAGGATGTCACCCCAACTTCTCTCCTGAAGGATCGAAAAAGAGAATTTGAAGGAAATCCTGATTTCTCTAATAAAGATGTTGGAGCATCTCAATCACAAATGATTACTGACATAAAATCTGGTCTTGTACCTCCAGTAAATCAAGTGGAATTGCCACTTGAAGTCACCAATCAATCAAATACGGGTGCTCATCCACATATGCTGTCTCAGTATGCTGGTCCTCTTCATATGTCTTCGGGTGCATTGATGGAAGATGAAAAGGTAACACCTTTGGGATTGTCTGATCAACTTCCCTCTGCTCAAGGGCTGTTACAAGCTACTCCTGCCCAAGCACCGTTTTCTATTAGCCAGCTTCCAACACAGATACCTAACATTGGGACTCACGTTATTATTAATCAAAAGCTCAGTGGTTTTGGTTTGCAAATGCATTTTCAGAGAGCGGTACCCATTGCAATGGATAGAGCTATCAAAGAGATAGTGTCTAGTATTGTGCAGCGTAGTGTTTCCATAGCAACACAAACTACAAAGGAGCTTGTTTTAAAGGATTATGCCATGGAATCTGATGAGACACGCATATTAAATGCAGCACACTTAATGGTCGCAAGTCTTGCTGGGAGTTTGGCTCATGTTACTTGCAAAGAGCCATTACGGGCATCGATCTCTGGTCAATTGAGGACTTCACTGCAGAACCTAAATATTGCTAATGAAATTTTGGAACAAGCTGTGCAACTTGTCACCAATGATAATCTTGATCTAGGCTGTGCTGTCATTGAACAGGCTGCTACTGATAAGGCAATAAACACCATCGATACAGAGATTGGTCAACAACTCTCTTTGAGAAGGAAGCATCGAGAAGGTATGGGTTCTACATTTTTTGATGCAAATTTGTATCCACAAGGTTCTATGGGTGGTGTTCCAGAGCCTCTTCGCCCTAAGCCTGGCCAGTTGTCACTGTCACAACAGCGTGTATATGAGGACTTTGTTCGGCTTCCATGGCAAAACCAGTCTAGCCAGAGCTCACATTCTATGTCTGCTGGTGTTGCTGGTCAATCTGGCAATACTGGTCTTCCTAGCACGAATGGTTCTGTCTCTGGTCAGGTTAACCCTGGTTACCCTGTGAGTACAGGATATGAAGGAGTATCTCGACCATTAGAAGATATGACAGAGTCTAACTTGGCTCAACATTTTAGTGCTTCCTCAATTCACATTAGAGCATCTGATAGTGCTTCCCAGCTAAGTTTGGAGAAAGAGTCTGTTGCCTCATTTCCTTCAGCTGCTTCCACGCCTGAGTTGCATGCAGTGGATTCGTCTGATGTGAAAGAATCTGGAACTTCTTCACAGACACTAGTCACATCAGGTGCTATGGAGCGCCTTGGAAGTAGTTTCTTGGAGCCTTCTCTCACAACAAGAGATGCCCTAGATAAATTCCAAATTGTTGCACATAAGTTGGAAGCTATGGTCAGCAATGATTCCAGGGATGCAGAAATCCAGGGTGTCATCTCTGAGGTTCCAGAGATCATACTTAGATGTGTTAGTCGAGATGAGGCAGCTTTAGCAGTGGCTCAAAAGGTTTTCAAGGGTTTATACGATAATGCATCAAACAACATCCATGTCTCTGCTCATCTTGCAATCTTGACTGCCATTCGTGATGTTTGCAAGCTTGCTGTGAAGGAGCTTACTAGTTGGGTAATTTACTCAGAAGAAGAAAGGAAATATAACAAAGAAACTACTATTGGCCTCATCCGTAGTGAATTGCTAAATCTTACTGAGTACAATGTTCATATGGCAAAACTTATTGATGGAGGAAGGAACAAGGCTGCAACGGAATTTTCCATTTCCCTTCTTCAAACCCTGGTTATCGAGGAACCTAAAGTTATTTCAGAACTTCACAATCTTGTTGATGCTTTGGCTAAGCTTGCTACAAAACCTGGATGCCCTGAGCCATTACCACAACTTCTTGAAATGATCAAGAATCCTGGTGCTCTAACCTCTGGCAATGCTGGAAAAGAGGACAAGGCAAGACAATCAAGAGACATTAAGGTTCCTGGTCTGCTACCTGCGAACAGGGAAGAGTTCAACAGCGTGGATTCTATTGAACCAGATCCAGCTGGGTTCCGGGAGCAGGTTTCCATTTTGTTTACAGAATGGTATAGGATATGTGAACTTCCTGGCGCCAATGATACAGTCTCCGCCCACTTCATCTTGCAATTGCATCAGAATGGCCTGCTGAAGGGGGATGATCTTACAGATCGATTCTTCCGCCTATTACTGGAGCTTGCGGTTGCACATTGCTTATCCACTGAAATGATTAATTCAGGGTCACTACAATCCCAACAGCTGCAGACAATGTCATTTCTTGCAGTTGATATTTATGCAAAGCTTGTCTTCTCAATCTTGAAGGGATCAAACAAACCCTTTCTTCTTTCCAAGATTCTGGCAGTTGCTGTCAGATTCATTATAAAAGATGCAGAGGAGAAGAAAGCATCTTTTAATCCAAGACCACTTTTCAGATTATTCATCAACTGGCTTCTAGATCTTGGTTCCCTTGAGCCTGTTACTGACGGTGCAAATCTTCAGATTTTGACTGCTTTTGCCAATGCATTTCATGCATTGCAGCCGCTTAAAGTTCCTGCGTTCAGTTTTGCATGGCTTGAGCTGATAAGTCACAGGAGCTTCATGCCTAAAATGTTGACTGGTAATGGTCAAAAGGGTTGGCCTTATATCCAACGGTTACTTGTAGACCTGTTCCAATTTATGGAGCCCTTTCTGAGGCATGCTGAACTGGGAGACCCGGTCCGTGTCCTCTACAAAGGGACACTTAGGGTGCTCTTAGTGCTACTTCATGACTTCCCCGAGTTTCTATGTGACTATCACTTTACCTTTTGTGATGTTATACCTCCAAGTTGCATACAGATGAGGAATATCATTCTAAGTGCATTTCCACGTAGTATGAGACTGCCCGATCCATCTACTCCTAATTTGAAGATTGATTTACTTCAAGAAATTACCCAATCACCCCGCATTCTTTCTGAGGTTGATGCTGCACTTAAAGCAAAGCAGATGAAGGCTGATGTAGATGACTACCTCAAGACAAGGCAACAAAGTTCTCCATTTTTGTCCGAACTGAAGGATAAGATGCTTCTCGCACCCAATGAAGCTGCCTCTGCTGGTACTCGATACAATGTGCCATTAATCAACTCACTTGTGCTATATGTTGGAATGCAGGCAATCCATCAGCTTCAGGGAAGAACTCCCCATGCACAATCTTCAGCAAATGCTTTCCCCTTGGCCGTATTTTCTGTTGGTGCTGCTTTGGATATTTTCCAGACACTCATCGTGGACTTGGACACCGAAGGCCGCTACCTTTTTCTAAATGCCATTGCCAACCAACTGCGTTATCCTAATACCAACACACACTACTTTTCTTTCATCCTTCTTTACTTGTTTGCTGAATCAAACCAGGAAGTTATCCAAGAACAAATTACTAGAGTCTTGTTGGAACGCCTAATTGTTAACCGTCCTCATCCCTGGGGCCTCCTCATTACCTTTATTGAACTTATCAAGAATCCTAGGTATAACTTCTGGAACCGGAGTTTCATCAGATGTGCCCCAGAGATCGAAAAGCTTTTTGAATCTGTGTCAAGATCTTGTGGAGGTCCAAAACCAGTGGATGACAACATGGTGTCTGGTTGGGTCTGA 7218 0.4192 MKTLLHSLPSMSNFSSNQIRFLLTTLNEVNFDSVFHQLSQFAEFGTTGCILLLQTCLDHYGYARRDTKDMQHEPILGAVIKYLLDKPNFSTVFSESMKNMEINESFLEIFCNGLQLSLLEKMVISLALSDSENPDVRLCGKNFCMSQIEELCANPGSMSFHEQIHSIIMFLKQSEGLSKHVDSFMQILSLVEFKDTPPFVLTPLLPDEMHEADFLRNMELFHDSGENDFDAILADIQKEMNMGDIVKELGYGCTVDVSQCKDIFSLFLPLTEHTLSKLLGAIACTHTGLEDNQNTYLNFRAAHGYNVSELPPLNSWNIDVLIDTVKHLAPHTNWVRVIENLDHEGFFLPSEEAFSFLMSVYKHACKEPFPLHAICGSVWKNTEGQLSLLKYAVSAAPEMFTFSHSGRQLVYADAINGHKLQNGHPNHSWLCLDLLDVLCQLAEKGHASVVRSILDYPLKHCPEVLLLGMAHINTAYNLLQQEVSLIVFPMIVKSAVGSGMILHLWHVNPNLVFRGIIDSQNHDSDSIIRIVDICQELKILSSVVEVIPSHYSIRLAAVASRKELLDFEKWLSSNLITYKETFFEECLKFLKDAHFGGSQNLSGQSFHPSSAVLSLYAETTATVLKVLKSHNDLVAPRHLSEELERLHISIIDSNPRIQNGGAADSSTSDGYADDIEAEANSYFHQMFSDQLTINAMVQMLARFKESSVKREKSIFDCMIANLFEEYRFFPKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFLFGSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVAFIEQALARISSGHSDGDGASHASVISNHHSAPATLGHVEQLSGPTVIQPGQQHLSLQLQQRRENLLDDRHKASVGSSTDVKPQLSSLGQSSVLTPTDASNTNKLHSSVSTSSMLSSSPGFVRPSRVPTSTRFGSALNIETLVAAAEKREIPIEAPGSEVQDKILFIINNVSAANIEAKSKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILGLLVEIYSMPNLKMNLKFDIEVLFKNLGVDMKDVTPTSLLKDRKREFEGNPDFSNKDVGASQSQMITDIKSGLVPPVNQVELPLEVTNQSNTGAHPHMLSQYAGPLHMSSGALMEDEKVTPLGLSDQLPSAQGLLQATPAQAPFSISQLPTQIPNIGTHVIINQKLSGFGLQMHFQRAVPIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYAMESDETRILNAAHLMVASLAGSLAHVTCKEPLRASISGQLRTSLQNLNIANEILEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTEIGQQLSLRRKHREGMGSTFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSAGVAGQSGNTGLPSTNGSVSGQVNPGYPVSTGYEGVSRPLEDMTESNLAQHFSASSIHIRASDSASQLSLEKESVASFPSAASTPELHAVDSSDVKESGTSSQTLVTSGAMERLGSSFLEPSLTTRDALDKFQIVAHKLEAMVSNDSRDAEIQGVISEVPEIILRCVSRDEAALAVAQKVFKGLYDNASNNIHVSAHLAILTAIRDVCKLAVKELTSWVIYSEEERKYNKETTIGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTLVIEEPKVISELHNLVDALAKLATKPGCPEPLPQLLEMIKNPGALTSGNAGKEDKARQSRDIKVPGLLPANREEFNSVDSIEPDPAGFREQVSILFTEWYRICELPGANDTVSAHFILQLHQNGLLKGDDLTDRFFRLLLELAVAHCLSTEMINSGSLQSQQLQTMSFLAVDIYAKLVFSILKGSNKPFLLSKILAVAVRFIIKDAEEKKASFNPRPLFRLFINWLLDLGSLEPVTDGANLQILTAFANAFHALQPLKVPAFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGDPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILSEVDAALKAKQMKADVDDYLKTRQQSSPFLSELKDKMLLAPNEAASAGTRYNVPLINSLVLYVGMQAIHQLQGRTPHAQSSANAFPLAVFSVGAALDIFQTLIVDLDTEGRYLFLNAIANQLRYPNTNTHYFSFILLYLFAESNQEVIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDDNMVSGWV* 2406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0588 2405 MobiDBLite consensus disorder prediction 887 939 - -
Pvu10g0588 2405 MobiDBLite consensus disorder prediction 893 939 - -
Pvu10g0588 2405 Pfam CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 1315 1457 IPR024557 -
Pvu10g0588 2405 Coils Coil 1401 1421 - -
Pvu10g0588 2405 Gene3D - 2156 2385 - -
Pvu10g0588 2405 MobiDBLite consensus disorder prediction 1508 1554 - -
Pvu10g0588 2405 Pfam CCR4-NOT transcription complex subunit 1 TTP binding domain 655 825 IPR032193 -
Pvu10g0588 2405 MobiDBLite consensus disorder prediction 1508 1544 - -
Pvu10g0588 2405 PANTHER BNACNNG58980D PROTEIN 17 2404 - -
Pvu10g0588 2405 Gene3D - 661 828 IPR038535 -
Pvu10g0588 2405 MobiDBLite consensus disorder prediction 1596 1623 - -
Pvu10g0588 2405 Pfam CCR4-NOT transcription complex subunit 1 CAF1-binding domain 969 1188 IPR032191 -
Pvu10g0588 2405 Gene3D - 1867 2155 - -
Pvu10g0588 2405 Gene3D - 942 1190 - -
Pvu10g0588 2405 Pfam CCR4-NOT transcription complex subunit 1 HEAT repeat 483 628 IPR032194 -
Pvu10g0588 2405 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 17 2404 IPR040398 GO:0017148|GO:0030015
Pvu10g0588 2405 Pfam CCR4-Not complex component, Not1 2017 2386 IPR007196 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0588 K12604 - gmx:100783935 4421.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0588 10 9420576 9442377 Pvu10g0588 10 9420576 9442377 ECH