Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0577 ATGGTGGCCACAGACCCACTTAGAGTTCTTGTCACTGGAGCTGCTGGGCAAATTGGATATGCACTTGTTCCAATGATTGCAAGAGGGGCAATGCTGGGCCCAGATCAGCCTGTGATTCTGCACATGCTTGACATTGAACCAGCAGCAGAGTCCTTGAAAGGAGTGAAGATGGAGCTGGTTGATGCTGCTTTTCCACTTCTTAAAGGTGTTGTTGCTACAACTGATGTTGTGGAAGCATGCAAGGATGTGAACATTGCTGTGATGGTGGGTGGATTCCCCCGGAAGGAAGGAATGGAAAGAAAAGATGTGATGTCTAAAAATGTGTCAATTTACAAGGCACAAGCTTCGGCACTGGAGAAACATGCTGCAGCAGATTGTAAGGTGCTGGTGGTTGCCAATCCAGCAAACACCAATGCTCTCATTTTGAAAGAGTTTGCTCCTTCAATCCCTGATAAAAACATCACCTGCCTTACACGACTTGATCACAATAGAGCTTTAGGCCAAATCTCTGAGAGGCTAAATGTTCAAGTCTCTGATGTGAAAAATGTCATCATTTGGGGCAATCACTCCTCAACCCAATATCCAGATGTCAACCATGCCACAGTCACTGCCAACGGTGCACAGAAGCCAGTCAGAGAATTAATTGGTGATGATAACTGGCTAAACAATGAGTTCATCGCCACTGTTCAGCAACGTGGGGCTGCCATAATTAAAGCCAGAAAGCTGTCTAGTGCATTATCTGCAGCAAGTTCTGCATGTGATCACATTCATGATTGGGTTGTAGGAACTCCTAAGGACACATGGGTGTCAATGGGAGTGTATTCTGATGGATCTTATGGTGTTCAAGCTGGCCTCATATACTCTTTCCCTGTGACTTGTGAGAAAGGAGATTGGACTATTGTTCAAAATCTGAAGATTGATGAGTTCTCAAGGGATAAGATGGACAAAACGGCCCAAGAGCTTGTTGAGGAGAAGGCATTGGCCAAATCATGTCTTGATTGA 1002 0.4511 MVATDPLRVLVTGAAGQIGYALVPMIARGAMLGPDQPVILHMLDIEPAAESLKGVKMELVDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAADCKVLVVANPANTNALILKEFAPSIPDKNITCLTRLDHNRALGQISERLNVQVSDVKNVIIWGNHSSTQYPDVNHATVTANGAQKPVRELIGDDNWLNNEFIATVQQRGAAIIKARKLSSALSAASSACDHIHDWVVGTPKDTWVSMGVYSDGSYGVQAGLIYSFPVTCEKGDWTIVQNLKIDEFSRDKMDKTAQELVEEKALAKSCLD* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0577 333 PANTHER MALATE DEHYDROGENASE 3 332 IPR010945 GO:0006108|GO:0016615
Pvu10g0577 333 PIRSF Lac_mal_DH 3 330 IPR001557 GO:0016616|GO:0019752
Pvu10g0577 333 TIGRFAM MalateDH-SF1: malate dehydrogenase 5 327 IPR010945 GO:0006108|GO:0016615
Pvu10g0577 333 Pfam lactate/malate dehydrogenase, NAD binding domain 8 154 IPR001236 GO:0016491
Pvu10g0577 333 PANTHER MALATE DEHYDROGENASE 3 332 - -
Pvu10g0577 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 155 IPR036291 -
Pvu10g0577 333 CDD MDH_cytoplasmic_cytosolic 5 328 IPR011274 GO:0006108|GO:0030060
Pvu10g0577 333 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 158 328 IPR022383 GO:0016616
Pvu10g0577 333 Gene3D - 157 333 IPR015955 GO:0003824|GO:0016616
Pvu10g0577 333 TIGRFAM MDH_euk_cyt: malate dehydrogenase, NAD-dependent 8 329 IPR011274 GO:0006108|GO:0030060
Pvu10g0577 333 ProSitePatterns Malate dehydrogenase active site signature. 157 169 IPR001252 GO:0006108|GO:0016615
Pvu10g0577 333 Gene3D - 4 156 - -
Pvu10g0577 333 SUPERFAMILY LDH C-terminal domain-like 158 332 IPR015955 GO:0003824|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0577 Pvu-Chr10 8911620 8915931 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0577 K00025 - gmx:100783188 587.8