Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0576 ATGATGCAGAGGAAAAGGGTAGGGTGGTGGTTCTTCACAAAGGCAAAGCTTAGCCTTAATGCATACCGAAACCTCTCTTCTTCTCAACACGTCATTCTCGACAACCCCAATCACTGTCAGGTTTTGGTCGAAGGAAATGGTTGCTCCAGAATGGCCATTCTCAATAGACCCTCTGCTCTCAATGCTCTCAACACCAACATGGCGGCTACGCTGCATAAACTCTATAGGAGTTGGGAAGATAACCCTGATATTGGTTTTGTGATGATGAAGGGCAGTGGCCGAGCGTTTGCAGCTGGTGGAGATATTGTTGCGCTTTACCATTTGATAAACAAAGGAAATATGGAAGCGTGTAAAGAATTTTTCAGAACAGCCTATAGTTTTATGTACCTGATAGGTACATATTTGAAGCCACATGTGGCACTTCTAAATGGCATTACCATGGGTGGTGGGGCCGGAGTTTCAATCCCTGGGACATTCCGTGTTGCAACAGACAAAACTATTTTTGCTACCCCTGAAGTTCATATTGGATTCCATCCTGATGCTGCAGCATCTTTTTACCTTTCACATTTACCTGGTCATTTAGGAGAGTACTTGGCTCTGACAGGGGAAAAGCTCAACGGAGTAGAGATGGTTACCTGCGGGCTTGCTACACACTATTCATCAAGTGCAAAGCTTCCTTTAATTGAAGAACAGCTGGGGAAATTGGTTACTGATGACCCATCTGTCATCGAAGCCACTTTAGAACATTATGGGGATCTTGCACAGCCAGACAGCAGTAGTGTACTACAAAGGATTGAAATTCTAGATAAATGCTTTTGCCATGACACAGTTGAAGAGATTGTTGATGCTATGGAAAATGCAGCAAGCGAAACAAAAGATGCATGGTGCATTTCCACCCTAAATAGACTGAAAGAAGCCTCTCCATTGAGCTTGAAGGTTGCCTTGAGATCTATACGGGAGGGTAGATTTCAGACCCTTGATCAATGTTTGGTGCGTGAGTACCGTATGACTTTACAAGCAATACATAGGAAAATATCTGGGGATATCTCTGAGGGAGTAAGGGCACGCGTGGTGGACAAGGACTTTGCACCAAAGTGGGATCCTCCAACGTTAGAAAATGTTTCTCAAGATATGGTGGATCAATACTTCTTTCCTCTTAGTGAGGCTGAACCTGATCTAGAGCTGCCTACAAAAAGTCGTGAAGCATTTTTGTAG 1215 0.4395 MMQRKRVGWWFFTKAKLSLNAYRNLSSSQHVILDNPNHCQVLVEGNGCSRMAILNRPSALNALNTNMAATLHKLYRSWEDNPDIGFVMMKGSGRAFAAGGDIVALYHLINKGNMEACKEFFRTAYSFMYLIGTYLKPHVALLNGITMGGGAGVSIPGTFRVATDKTIFATPEVHIGFHPDAAASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLATHYSSSAKLPLIEEQLGKLVTDDPSVIEATLEHYGDLAQPDSSSVLQRIEILDKCFCHDTVEEIVDAMENAASETKDAWCISTLNRLKEASPLSLKVALRSIREGRFQTLDQCLVREYRMTLQAIHRKISGDISEGVRARVVDKDFAPKWDPPTLENVSQDMVDQYFFPLSEAEPDLELPTKSREAFL* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0576 404 Gene3D - 36 399 - -
Pvu10g0576 404 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 28 403 IPR032259 GO:0003860
Pvu10g0576 404 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL 28 403 - -
Pvu10g0576 404 SUPERFAMILY ClpP/crotonase 46 369 IPR029045 -
Pvu10g0576 404 CDD crotonase-like 41 225 - -
Pvu10g0576 404 Pfam Enoyl-CoA hydratase/isomerase 50 383 IPR045004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0576 Pvu-Chr10 8899093 8908102 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0576 40 403 Miscellaneous Gene Families AT3G60510 64.781 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0576 K05605 - gmx:100801676 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0576 10 8899093 8908102 Pvu10g0576 10 8899093 8908102 ECH