Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0573 ATGGCTTCTAACGCCATTATCCAATACACCTCTTCTTCTTCGTCTCTTGCAACTCACATCTACGACCTATTTGTCAGCTTCCGCGGTGAAGACACGCGCAACACCTTCACTAGTTTTCTCTTTCAGGCTCTCCGTACAAAAGGCATCATTGTCTTCAAAGATGACGAAGATCTCAAAAAAGGTGAATCCATTGCACCCGAGCTGCTGCAAGCCATTCAAGCACTACACCATTTTCTATCTATGGTTTCACTCTGTTCTCTGTGCTTCATCTACGTCCTGCTCGTTCGCTCGGTCAAACGACTACTGCTACGTGCGCGCGTGTGTGTCGTTGCTACTGCTACGTGCGTGTGTGCCACTGCTACGTGCGTTGTCTCATTCTTTCGGAGTTAA 390 0.4795 MASNAIIQYTSSSSSLATHIYDLFVSFRGEDTRNTFTSFLFQALRTKGIIVFKDDEDLKKGESIAPELLQAIQALHHFLSMVSLCSLCFIYVLLVRSVKRLLLRARVCVVATATCVCATATCVVSFFRS* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0573 129 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 83 IPR035897 -
Pvu10g0573 129 Pfam TIR domain 21 74 IPR000157 GO:0007165
Pvu10g0573 129 ProSiteProfiles TIR domain profile. 19 129 IPR000157 GO:0007165
Pvu10g0573 129 PANTHER TMV RESISTANCE PROTEIN N-LIKE 15 80 - -
Pvu10g0573 129 Gene3D - 2 89 IPR035897 -
Pvu10g0573 129 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 15 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0573 Pvu-Chr10 8848784 8851898 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0573 - - pvu:PHAVU_010G055300g 209.149