Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0568 ATGGCTTCTAACGCCATCATCCAATACACCTCTTCTTCTTCATCTCTTCCAACTCACATCTACGACGTCTTTGTCAGCTTCCGCGGTGAAGACACGCGCAACACCTTCACTGATTTTCTCTTTCATTCTCTCCGTACAAAAGGCATCAATGTGTTCAAAGATGATGAAGATCTCAAAAAGGGTGAATCCATTGCACCCGAGCTGCTGCAAGCCATTCAAGTCTCAAGGCTTTTCATTGTTGTCTTCTCAGAAAACTATGCTTCCTCCACTTGGTGCTTGCGTGAACTGGCAGAGATATGTAACTGCTGTGAAACTTCGCCAAGTGTTATTATACCTATATTTTATGACGTTGATCCTTCGGTGGTTCGCAAACAGAGTGGACGTTATGAGAAAGCATTTGCAGAACACGAAAAGAGATTCGGAGAAGATGAAGTGAAGATGGAGGAAGTTCAGAGATGGAGACAAGCTCTCACACAAGTCGCCAATATCTCTGGTTGGGATATCCGAAATAATGAAGTTATGCGGATGATGATAGAGGACCATCCGGAAGGACACAATATTGGACCTTTAACTAGGGCCATGACTAGAAGAATGGAAGAAGAAGAAGAAGGAGTTTAG 618 0.4353 MASNAIIQYTSSSSSLPTHIYDVFVSFRGEDTRNTFTDFLFHSLRTKGINVFKDDEDLKKGESIAPELLQAIQVSRLFIVVFSENYASSTWCLRELAEICNCCETSPSVIIPIFYDVDPSVVRKQSGRYEKAFAEHEKRFGEDEVKMEEVQRWRQALTQVANISGWDIRNNEVMRMMIEDHPEGHNIGPLTRAMTRRMEEEEEGV* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0568 205 ProSiteProfiles TIR domain profile. 19 181 IPR000157 GO:0007165
Pvu10g0568 205 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 166 IPR035897 -
Pvu10g0568 205 Gene3D - 17 183 IPR035897 -
Pvu10g0568 205 Pfam TIR domain 21 171 IPR000157 GO:0007165
Pvu10g0568 205 PANTHER TMV RESISTANCE PROTEIN N-LIKE 16 174 - -
Pvu10g0568 205 SMART till_3 20 163 IPR000157 GO:0007165
Pvu10g0568 205 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 16 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0568 Pvu-Chr10 8664723 8668986 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0568 21 180 Miscellaneous Gene Families AT5G44900 32.121 6.94e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0568 - - pvu:PHAVU_010G055500g 286.96