Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0563 ATGGCTTCTAACGCCATCATCCAACACGACTCCTCTTCTTCATCTCATGCAACTCACACCTACGACGTCTTTGTCAGCTTCCACGGCGTGGACACGCGCAACACCTTCACTGATTTTCTCTTTAATTCTCTCCGTACAAAAGACATCAATGTGTTCAAAGAAGATAAAGATCTCAAAAGAGGTGAATCCATTGCACCCAAGCTGCTGCAAGCCATTCAAGCCTCTCGACTTTTCATTGTTGTCTTCTCACAAAACTATGCTTCCTCCACTTGGTGCTTGCGTGAACTGGCAGAGATATGTAACTGCCGTGAAACTTCGCCAAGTGTTATTATACCTATATTTTATGACGTTGATCCTTCGGTGGTGCGCAAACAGAGTGGATGTTATGAGAAAGCATTTGCAGAACACGAAAAGAGATTCGGAGAAGATGAAGTGAAGATGGAGGAAGTTCAGAGATGGAGACAAGCTCTCACACAAGTCGCCAATATCTCTGGTTGGGATATCCGAAATAAGTCACAATGTGAACAGATTGAAAAAATTGTTCAAGAGATAATAAATATTTTGTGTTCCAAAAGACTTCCGAAGGAGGAACTGGTTCGGATTGGTGGAACTATTACTGAGATTTTCAGTGAAAGATTCGATCAAAAATATAAATTTCCTGATTTTATTGATGATGCAAGCAAAATTCTTAAAGGAAAGAAGAATTTAGTGAAATATTTAGTGGGCCGAATCACTTCAAAAATTAATTTTAAAAAAAATAATTAA 765 0.3895 MASNAIIQHDSSSSSHATHTYDVFVSFHGVDTRNTFTDFLFNSLRTKDINVFKEDKDLKRGESIAPKLLQAIQASRLFIVVFSQNYASSTWCLRELAEICNCRETSPSVIIPIFYDVDPSVVRKQSGCYEKAFAEHEKRFGEDEVKMEEVQRWRQALTQVANISGWDIRNKSQCEQIEKIVQEIINILCSKRLPKEELVRIGGTITEIFSERFDQKYKFPDFIDDASKILKGKKNLVKYLVGRITSKINFKKNN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0563 254 Gene3D - 15 194 IPR035897 -
Pvu10g0563 254 PANTHER TMV RESISTANCE PROTEIN N-LIKE 13 192 - -
Pvu10g0563 254 ProSiteProfiles TIR domain profile. 19 188 IPR000157 GO:0007165
Pvu10g0563 254 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 166 IPR035897 -
Pvu10g0563 254 Pfam TIR domain 21 192 IPR000157 GO:0007165
Pvu10g0563 254 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 13 192 - -
Pvu10g0563 254 SMART till_3 20 163 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0563 Pvu-Chr10 8595794 8596857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0563 11 196 Miscellaneous Gene Families AT5G45220 30.688 2.40e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0563 - - pvu:PHAVU_010G055500g 314.694