Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0554 ATGGCAGGAGGTTTGATTGAAACTGGGTCTTCGAGAGGAAAGAATTATCCAGGAAAACTCACATTTAGAGTCTTCATAACATGTTTGGTAGCAGCATTTGGAGGTTTGATCTTTGGTTACGATCTTGGCATATTGGGTGGTGTGACTTCTATGGATCCTTTTCTAAAGAAGTTCTTCCCCACAGTCTATGAAAAGGAGAACAACATGAAGCCCTCTGACAACCAGTACTGCAAATTTGACAGTCAAACATTGACGTTGTTCACATCGTCTCTGTATTTGGCTGCTCTTGTTGCGTCAATCTTTGCATCCAGTGTCTCTCGAGTCTTCGGAAGGCGCCTCAGCATGATCTCTGGGGGTGTGCTCTTTCTTGCTGGTGCTGGACTAAATGCCTTCGCTCAACATGTTTGGATGCTCATTGTTGGTCGCATTTTACTTGGCTTTGGAATTGGATTCGCCAATCAGTCTGTGCCAATCTATGTGTCTGAGGTTGCTCCTTATAAGTTTCGAGGAGCTCTTAACATGATGTTCCAACTAGCAATCACCATTGGCATATTCATTGCTAATGTTCTCAACTACGTATTTGCCAAAATGGAGAACGGAGAAGGTTGGCGCTATAGCTTGGGCTTCGCTGCAGTCCCTGCCATCATGATCATCATCGGTGCAATCTTTCTTCCAGATTCACCAAGTTCTTTGATCGAGCGTGATCTGAATGAGGATGCCAAGAAGGAACTCATTAAGATTCGAGGAAGCAGTGACATTGAGGAGGAGTTTCAAGATCTTGTGGCAGCCAGTGAATCCTCCAAGGCAGTGAAACACCCTTGGGCTACTTTGTTGAAGAGGCAATATAGGCCTCAACTTACATTTACAGTGTTCATTCCCTTATTCCAACAACTCACTGACATGAATGTGATAGTGTTTTATGCTCCTGTTTTGTTTAAAACTATTGGTTTTGGAGCAAATGCTGCTCTCATGTCTGCCATGATCACCGGGGGTTGCAACGCAATTGCCACTCTTGTCTCCATACTAACTGTTGACAAGTTCGGGAGACACACTCTTTTCTTAGAAGGAGGTACACAAATGTTTATCTGTCAGATTGTGATTACTATGGCGATTGCATGCAAATTCGGACTTGATGGAAACCCGGGAGTGTTGCCAAAGTGGTATGCTATCGTGGTTGTGTGTGGCATATGCATTGAGATTTTTCCACTTGAAGTGCGATCAGCTGCCCAGAGTATCAATGTCTCTGTTAACATGATCTTCACCTTTGCCATTGCCCAGATCTTCACCTCCATGCTCTGTCACATGAAGTTTGGACTCTTCATTTTCTTTGCATGCTTTGTCGTTCTCATGACTATATTCATCTTCAAGCTTCTCCCAGAGACCAAAGGAATTCCTATTGAAGACATGCATGTTGTTTGGCAGACTCACCCTTACTAG 1437 0.4384 MAGGLIETGSSRGKNYPGKLTFRVFITCLVAAFGGLIFGYDLGILGGVTSMDPFLKKFFPTVYEKENNMKPSDNQYCKFDSQTLTLFTSSLYLAALVASIFASSVSRVFGRRLSMISGGVLFLAGAGLNAFAQHVWMLIVGRILLGFGIGFANQSVPIYVSEVAPYKFRGALNMMFQLAITIGIFIANVLNYVFAKMENGEGWRYSLGFAAVPAIMIIIGAIFLPDSPSSLIERDLNEDAKKELIKIRGSSDIEEEFQDLVAASESSKAVKHPWATLLKRQYRPQLTFTVFIPLFQQLTDMNVIVFYAPVLFKTIGFGANAALMSAMITGGCNAIATLVSILTVDKFGRHTLFLEGGTQMFICQIVITMAIACKFGLDGNPGVLPKWYAIVVVCGICIEIFPLEVRSAAQSINVSVNMIFTFAIAQIFTSMLCHMKFGLFIFFACFVVLMTIFIFKLLPETKGIPIEDMHVVWQTHPY* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0554 478 TIGRFAM SP: MFS transporter, sugar porter (SP) family 15 468 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0554 478 CDD MFS_STP 30 460 IPR044778 GO:0015145|GO:0015749
Pvu10g0554 478 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 2 478 IPR045262 GO:0015144
Pvu10g0554 478 SUPERFAMILY MFS general substrate transporter 19 469 IPR036259 -
Pvu10g0554 478 Gene3D MFS general substrate transporter like domains 11 476 IPR036259 -
Pvu10g0554 478 ProSitePatterns Sugar transport proteins signature 2. 144 169 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu10g0554 478 PRINTS Sugar transporter signature 35 45 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0554 478 PRINTS Sugar transporter signature 139 158 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0554 478 PRINTS Sugar transporter signature 398 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu10g0554 478 Pfam Sugar (and other) transporter 28 473 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu10g0554 478 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 2 478 - -
Pvu10g0554 478 ProSiteProfiles Major facilitator superfamily (MFS) profile. 27 462 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0554 Pvu-Chr10 8376796 8378368 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0554 2 478 Organic Solute Cotransporters AT1G11260 64.242 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0554 K24193 - gmx:102662083 747.658