Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0534 AGAGGTCTATGGAAAGTGTTTCAAAGGTGGGGAAGAATCCTGGATGTTTTCATTTCTAGAAAGCTTAATGCAAGGAATCGGAGGTTTGGTTTCGTTAGGTTCCATGGGGTGTCCGATGCGCATTCCCTGGAAAGAAAGTTGGACGCAATCTGGATTGGCACGTGGAAGTTACAGTCTGGAATCCGAAGGGGCAACAAAAGCAACAACTATCCTTTTCTCAAGTCGTGGCGGTTTCCGGTAGACATGGAGTCTTCTTCTTGGTTGAAGGGTTGTTTTATCGGCCATCTTAGGGAGTCTGCAAAGTTGCAGTCGATTAAGGAAAGCTTCATACTGGGAGGTTTTAGCCTGGTTAGGGTAAGACTACTCGGGGAGAACTTGTTTTCGGAGTTGAGTCCTTGGCGCGATTCATTTGTTGTCCCTGAAAGATTCGCATGGGTTCACTGTAGAGGAATTCCTTTACAATTGTGGTGTAACCAATGTTTCATTAGCATTGGGTCTCTGGTTGGGGAAGTCATTGAGGTTAATGCTGCAATCGAGAAGAATGAATTGTTAGAGTTTGCCCGTGTTAGGGTTAAGATCCAGATGCCAGTGCGGTTAGTCTGGTGA 606 0.4571 RGLWKVFQRWGRILDVFISRKLNARNRRFGFVRFHGVSDAHSLERKLDAIWIGTWKLQSGIRRGNKSNNYPFLKSWRFPVDMESSSWLKGCFIGHLRESAKLQSIKESFILGGFSLVRVRLLGENLFSELSPWRDSFVVPERFAWVHCRGIPLQLWCNQCFISIGSLVGEVIEVNAAIEKNELLEFARVRVKIQMPVRLVW* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0534 201 Pfam Domain of unknown function (DUF4283) 143 191 IPR025558 -
Pvu10g0534 201 CDD RRM_SF 3 58 - -
Pvu10g0534 201 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 8 195 - -
Pvu10g0534 201 Gene3D - 1 72 IPR012677 -
Pvu10g0534 201 PANTHER RNA RECOGNITION MOTIF 8 195 - -
Pvu10g0534 201 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 51 IPR000504 GO:0003723
Pvu10g0534 201 SUPERFAMILY RNA-binding domain, RBD 3 108 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0534 Pvu-Chr10 8172978 8173824 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0534 - K12891 pvu:PHAVU_010G051400g 417.542