Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0533 ATGAATCCTTTAGATCCTAAAGAATTTAGGAGGCAAGGGCACATGATGATTGACTTCCTTGCTGATTATTACCAGAATGTTGGCAACTATCCAGTGTTAAGTCAAGTAGAGCCAGGTTATCTTAGAAATCTCATACCAGATTTTGCCCCTCTCAAACCTGAACCTATTGAAACCATCCTTCAAGATTTTCAGCAGCACATAGTTCCTGGCATAACACACTGGCAAAGCCCTAATTACTTTGCCTACTTTCCCTCCAGTGGCAGCACAGCAGGGTTTCTTGGTGAGATGCTGAGCACAGGATTGAACTTGGTAGGGTTCAATTGGGTGTCATCACCGGCTGCAACAGAGCTAGAAAGTGTCGTCATGGATTGGCTGGGCCAGGTGCTGAAGCTCCCCAAGGCTTTTCTCTTTTCAGGTAATGGTGGAGGCGTGTTGTTAGGGACAACATGTGAGGCCCTTTTGGTCACACTAGTTGCTGCTAGAGATAAAATGCTTAGCCGAATTGGTAGAGAAAATATTTGTGAGCTAGTCGTTTATGTGTCTGATCAAACACATTGTGCTGTTCAGAAAGCAGCTCATATAATAGGAATTCAACCCAAAAATATTAGGGTAATCAAGACTATGAAGTCTACTTCTTTCACTTTATTGCCAGAATCACTGTTATCCGCCATTCAAACAGACGTGCAAAATGGGTTGGTTCCTTGTTATCTTTGTGTCACAGTGGGCACAACTTCAACCACTGCTGTTGATCCATTGGGACCACTGTGCAAGGTGGCAAAAAAATATGGCATGTGGGTCCATGTTGATGCTGCTTATGCTGGTAGCGTGTGCATTTGTCCTGAGTTCAGACACTTGATTGATGGAGTTGAGGATGCAAACTCGTTTAGTTTCAATGCTCACAAATGGTTTCTCACTAACTTAGATTGTTGCTGTCTTTGGGTGAAGGATCCAGCTTCTGTGATAAAATCCCTATCAACACATTCAGTGTATTTAGAGAACAGTGCTACTGATTCAAAACAAGTGGTGGACTACAAGGATTGGCAGATAACCTTGAGCAGAAGATTCCGTGCACTAAAAGTTTGGCTTGTTCTGAGAAGCTATGGTGTTGCTAATCTTAGAAACTTCCTCAGAAGCCACGTTGAAATGGCCAAGACTTTTGAAAAGTTGGTGAGAAGGGACAAAAGATTTGAGATCTTTGTGCCTAGAAATCTTGCTCTGATTTGCTTTAGGCTTTTACCTTCAGCAGTTGCAAAGATTGGTAATGGCAAGGTTCAAAATGGAGGTTTCAAAAATGAGGATGTTGCAAATGATATCAACCGTAGATTGCTGGATTCAATCAATGGTTCAGGCACTGTGTACATGACTCATGCAATTGTTGGAGGGGTTTTCGTGATTAGGTGTGCCATAGGAGCAACCCTCACTGAAACAAAACATGTTATCATGGCCTGGAAGGTGGTGCAGGAATATGCAGATGCCATTCTTAATTACTGA 1491 0.4259 MNPLDPKEFRRQGHMMIDFLADYYQNVGNYPVLSQVEPGYLRNLIPDFAPLKPEPIETILQDFQQHIVPGITHWQSPNYFAYFPSSGSTAGFLGEMLSTGLNLVGFNWVSSPAATELESVVMDWLGQVLKLPKAFLFSGNGGGVLLGTTCEALLVTLVAARDKMLSRIGRENICELVVYVSDQTHCAVQKAAHIIGIQPKNIRVIKTMKSTSFTLLPESLLSAIQTDVQNGLVPCYLCVTVGTTSTTAVDPLGPLCKVAKKYGMWVHVDAAYAGSVCICPEFRHLIDGVEDANSFSFNAHKWFLTNLDCCCLWVKDPASVIKSLSTHSVYLENSATDSKQVVDYKDWQITLSRRFRALKVWLVLRSYGVANLRNFLRSHVEMAKTFEKLVRRDKRFEIFVPRNLALICFRLLPSAVAKIGNGKVQNGGFKNEDVANDINRRLLDSINGSGTVYMTHAIVGGVFVIRCAIGATLTETKHVIMAWKVVQEYADAILNY* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0533 496 PRINTS Aromatic-L-amino-acid decarboxylase signature 9 28 IPR010977 GO:0006520|GO:0016831
Pvu10g0533 496 PRINTS Aromatic-L-amino-acid decarboxylase signature 32 49 IPR010977 GO:0006520|GO:0016831
Pvu10g0533 496 PRINTS Aromatic-L-amino-acid decarboxylase signature 50 69 IPR010977 GO:0006520|GO:0016831
Pvu10g0533 496 PRINTS Aromatic-L-amino-acid decarboxylase signature 76 95 IPR010977 GO:0006520|GO:0016831
Pvu10g0533 496 PRINTS Aromatic-L-amino-acid decarboxylase signature 97 115 IPR010977 GO:0006520|GO:0016831
Pvu10g0533 496 PRINTS Aromatic-L-amino-acid decarboxylase signature 116 135 IPR010977 GO:0006520|GO:0016831
Pvu10g0533 496 PRINTS Aromatic-L-amino-acid decarboxylase signature 141 161 IPR010977 GO:0006520|GO:0016831
Pvu10g0533 496 PRINTS Aromatic-L-amino-acid decarboxylase signature 350 365 IPR010977 GO:0006520|GO:0016831
Pvu10g0533 496 PRINTS Aromatic-L-amino-acid decarboxylase signature 393 412 IPR010977 GO:0006520|GO:0016831
Pvu10g0533 496 Gene3D - 86 377 IPR015421 GO:0003824
Pvu10g0533 496 SUPERFAMILY PLP-dependent transferases 5 491 IPR015424 -
Pvu10g0533 496 Pfam Pyridoxal-dependent decarboxylase conserved domain 38 411 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pvu10g0533 496 Gene3D - 1 84 - -
Pvu10g0533 496 Gene3D Aspartate Aminotransferase, domain 1 378 496 IPR015422 GO:0003824
Pvu10g0533 496 PANTHER TYROSINE DECARBOXYLASE 1 495 - -
Pvu10g0533 496 PANTHER GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE 1 495 - -
Pvu10g0533 496 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 294 315 IPR021115 GO:0016831
Pvu10g0533 496 CDD DOPA_deC_like 79 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0533 Pvu-Chr10 8160870 8162654 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0533 K01593 - gmx:100787822 913.679