Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0522 ATGGAATTCAAATATAGAGATGGTCAAAATCAAATGGTACCAGCAACATTACCACAAGCTCTTCCCCCTATCATCTCTGGGTTTGAGTTTGGAGCAAGAGGTTTTCCTAGCAATGTTGCTGTGCCTAGTTTTGTACCAGCATTTGTGGGAACCAGTTCCAGGGAAACATTCCAACAAGAATTGCAGAAAGAACAGAAAATACTCAGAGAACTGGTGAAGGAAGAGATTAGGAGAGAAATAATCATCAGTGAGATGATATTAGCAAGACGAAAAGAGTTGGAGGAAGAAGTGAGGAGGGAAATGGCTGAAGGAATAGGGAAAATTCCCATGCAAAGACTACCTAGAATCAGCTTTGGAGAACCAATTTCAATGCCTTTTACTCCAACGATGACTCAATTTAATGACAATAATCATGATAGTTTCAGAAAACATCATAGGCAGAATAACGAGAAGGATAATGTTATTATACTGGCTAAACCAGAAGCTGGTAATTTATGTGGAAAACGAAAAGCAGTGACACTTTTGACACCTGCTATAATTGATGGCAATAAACATGGGTCATCTAGTTTGGAGAAGAAAGCAAAACAGGAGTGGAGTTGCAGCCTGTGTAAGATTTTTACCACAAGTGAGAAAGGATTGAGTGATCATTTTCAGGGTAGAAAACATAAGTCTAAAGAAGCATCCTCAAAAATCCCAAAAATAGGTAACAAAAAAAGAACCTTTATTCATTATATTATTGAGAAAATGCAAAAGGGTGTTTGTTTGAAATATACTAAACTCATTGCTACCATGAATTGCAGGACTGGTTTCAGGTTCACATACCCAAAACAGTGCTGCTACTGCTGCAAATCCTGCATGCATCAAACAAACAAAGTACTTGTTATGAATGTTGTTAAAACCATTTATCAGTTGAGATCAAAATACATAGATTTTTCTTACAAATTTAAAAATTCATCGTAA 960 0.3646 MEFKYRDGQNQMVPATLPQALPPIISGFEFGARGFPSNVAVPSFVPAFVGTSSRETFQQELQKEQKILRELVKEEIRREIIISEMILARRKELEEEVRREMAEGIGKIPMQRLPRISFGEPISMPFTPTMTQFNDNNHDSFRKHHRQNNEKDNVIILAKPEAGNLCGKRKAVTLLTPAIIDGNKHGSSSLEKKAKQEWSCSLCKIFTTSEKGLSDHFQGRKHKSKEASSKIPKIGNKKRTFIHYIIEKMQKGVCLKYTKLIATMNCRTGFRFTYPKQCCYCCKSCMHQTNKVLVMNVVKTIYQLRSKYIDFSYKFKNSS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0522 319 Coils Coil 83 103 - -
Pvu10g0522 319 Pfam Zinc-finger of C2H2 type 198 222 - -
Pvu10g0522 319 SUPERFAMILY beta-beta-alpha zinc fingers 181 228 IPR036236 -
Pvu10g0522 319 Gene3D Classic Zinc Finger 184 235 - -
Pvu10g0522 319 PANTHER OS06G0651300 PROTEIN 1 236 - -
Pvu10g0522 319 Coils Coil 54 78 - -
Pvu10g0522 319 PANTHER OS06G0651300 PROTEIN-RELATED 1 236 - -
Pvu10g0522 319 SMART ZnF_U1_5 195 229 IPR003604 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0522 Pvu-Chr10 7967523 7969516 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0522 - - pvu:PHAVU_010G050200g 611.298