Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0517 ATGGGCAACGAAGAAGAAGAAGAAGAATTGGTGGCTGAAGTTGAAGCAGTGGAAGCCGTGTATGGAACCGATTGCGTCCTTCTCAGTTCATTTCCTCCCCATTTCCACCTCTTTCTCAAACCCAGAACAGCTGATGTTTCCTCCCAACAGTTTGTAGAAGCTGTTCTGGAGATACGAGCTACCTCACAGTATCCAAAAGAACCACCTTCTATTGAGCTTGTGGATTGCAAGGGTCTGGATGAACAGAGACAGAAACATCTATTAAATTACATACAAAGTAAAGCCCGTGAGATCTCCCCTTGTTTAATGCTTGTAGCTCTTTGTGAGGAAGCTGTTGAGAAACTTTCAGCTATGAATCATCCTGATGGTGATTGTCCACTGTGTTTATTCCCTTTGGTCCCAGAAGATCAGCAAAGCGAAAGTTTGCCTTTTATGAAGTTAATGTCTTGTTTTCATTGCTTTCACAGTGAGTGTATCATTAGATGGTGGAAATGGCTTCAAAATTCTAAAGAATCAGACTCTGCCAATACAGATAGTACAGCTGCACATCGTAACCAAGATAAGCATAAGAAAATGGAGGAGAGTGTTGGAAACTGCCCAGTCTGTCGCAAACCTTTTCTTGCCAAGGATTTGGACCACGTGCTTGCCCTAGTTGGATCATATTCTTCCCAATTGAGTTCAGACAATGAAGAACTCAAGGACGAGGAAACGGTCCTTCAATCAGAGGATGAGATGATTAGGAGACAGAAATTTGAAGCGATCCTAAATTTACAGAAGGAGAACAGTGGCTTGATTGAACCCAAAAAAGATATAGTCATATTACCTGGTATGTATCTTCCACAACCAGTTGCAATGCCGAGCTCTACACCAACCAAGGAATCTGATGAGCAGACACAAAATGAACCACCTGCAGTTGTGTCAGGAAAACAAGCCGGTGGGACATCCAATGGAGCTAGTTCTAGCAGGCAGAGGAATTTCGGTCCAAGGAGGCAGAAAGCAAGAAGTGACAACCACTCTAGTTCAACTGTAAGAAATACCAGAAAACCAGTACAACAGTGGGTAAGAAGAGATAGTCCTAGCAATAAGCAATAG 1092 0.4286 MGNEEEEEELVAEVEAVEAVYGTDCVLLSSFPPHFHLFLKPRTADVSSQQFVEAVLEIRATSQYPKEPPSIELVDCKGLDEQRQKHLLNYIQSKAREISPCLMLVALCEEAVEKLSAMNHPDGDCPLCLFPLVPEDQQSESLPFMKLMSCFHCFHSECIIRWWKWLQNSKESDSANTDSTAAHRNQDKHKKMEESVGNCPVCRKPFLAKDLDHVLALVGSYSSQLSSDNEELKDEETVLQSEDEMIRRQKFEAILNLQKENSGLIEPKKDIVILPGMYLPQPVAMPSSTPTKESDEQTQNEPPAVVSGKQAGGTSNGASSSRQRNFGPRRQKARSDNHSSSTVRNTRKPVQQWVRRDSPSNKQ* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0517 363 ProSiteProfiles RWD domain profile. 12 118 IPR006575 GO:0005515
Pvu10g0517 363 SUPERFAMILY UBC-like 6 115 IPR016135 -
Pvu10g0517 363 PANTHER RING FINGER PROTEIN 25 5 353 IPR039133 GO:0061630
Pvu10g0517 363 SMART RWD2001b 12 118 IPR006575 GO:0005515
Pvu10g0517 363 MobiDBLite consensus disorder prediction 284 326 - -
Pvu10g0517 363 Gene3D Ubiquitin Conjugating Enzyme 1 120 IPR016135 -
Pvu10g0517 363 ProSiteProfiles Zinc finger RING-type profile. 125 203 IPR001841 -
Pvu10g0517 363 SUPERFAMILY RING/U-box 117 209 - -
Pvu10g0517 363 MobiDBLite consensus disorder prediction 338 363 - -
Pvu10g0517 363 Pfam RWD domain 9 114 IPR006575 GO:0005515
Pvu10g0517 363 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 217 IPR013083 -
Pvu10g0517 363 SMART ring_2 125 202 IPR001841 -
Pvu10g0517 363 MobiDBLite consensus disorder prediction 283 363 - -
Pvu10g0517 363 MobiDBLite consensus disorder prediction 172 192 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0517 K10640 - gmx:100791789 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0517 10 7841761 7848251 Pvu10g0517 10 7841761 7848251 ECH