Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0514 ATGTCTTGTGGTCTTCGCAGTACTTCTTCAGCTGTTGTCCAGGTGGAAAATGCAGAATCTTATTCAGTTGCAATTAACAATGCGGGAATCAAAGTTTCAGTTGAGGACCGTAAGAAAATTATTTTTGAGCAATCTAATGCATTAGCAAAAGGTGTAAATGGCCAAATTCTTATTCCAAAAGGTTTGCTTGACGAGGTTGTAAATCTTGTTGAGGCTCCTTTTCCCGTGCTTGGAAAGTTTAAAGAGACTTTCTTAGATCTTCCAAAAGATCTTTTAACAATGGTTATGCAAAAACATCAAAAGTATTTTGCTGTATGTGATGCAAATGGACAATTATTGCCTTATTTCATTGCTGTTGCAAATGGAGCAATTGATGAGACTACAGTGAGGAAAGGAAATGAAGCTGTGCTCAGGGCTCGCTATGAAGATGCAAAGTTCTTTTATGAGATGGACACCCGTAAAAGGTTTACAGAATTCCGAAAGCAACTGAAAAACATTCTATTTCATGAAAAGCTTGGGACCATGCTTGATAAGATGACTCGTGTTGAAAATATGGTTACTGAACTAAGTTGCATCCTAGATATCAGTGAAGATGTGCAACAAATTACCCGTGATGCTGCCTCACTTGCAATGTCTGATCTTTCCACTGCAGTTGTCACTGAATTTACCTCACTTTCGGGAATTATGGGGCGTCACTATGCCCTTAGAGATGGATACTCAGAGCAGATTGCAGAGGCCTTGTTTGAGATCACGCTTCCTAGATTTTCTGGGGACACGCTTCCTGAAAGTGATGCTGGCATAGTTTTGGCAATTGCTGATAGATTAGATAGCCTGGTAGGTTTATTTTCTGCTGGTTGTCAACCTAGTTCCTCAAATGATCCGTTTGGTCTGAGAAGAATCTCATATGGTCTTGTGCAACTATTGGTGGAAAAGAATAAAAATCTAGATTTTAAAAAGGCCCTGGAACTTGCAGCAGAAGTCCAGTCCATTAAAGTAGATCCTCATGTAATAGATGATGTACTTCAATTTGTCACGCGAAGATTAGAGCAATTTCTGATTGACAAGGGGGTGAATGCAGAATTTGTGCGGTCAATCCTTGTTGAAAGAGCAAATTTTCCCTGTCTTGCAGCAAAATCAGCATATAAAATGGAAGAATTATCAAGAGGGGACCTTTTTTTTAAAGTTGTTGAAGCATACTCCCGGCCAACTAGAATTGTCCGTGGGAAGGAAGATGAACTTCATACGGAGGTGGATGAGGCTGCTTTTGTGACAAATGAAGAGAGAGTTTTATGGAACACGTTTTTGTCTGTTAAAAAGAGTATCAATCCTGGTCTCGAAATAGATGATTTCGTAGAAACTTCATGTCAGTTGATACAGCCACTTGAGGATTTCTTTAATAATGTCTTTGTAATGGTGGACGATGACAAGATCAGAGTAAACAGGTTAACTTTGCTGAAAGGAATTGCTGATCTCCCCAAAGGAATAGCAGACCTTACTGTTCTACCAGGATTTTAA 1515 0.3934 MSCGLRSTSSAVVQVENAESYSVAINNAGIKVSVEDRKKIIFEQSNALAKGVNGQILIPKGLLDEVVNLVEAPFPVLGKFKETFLDLPKDLLTMVMQKHQKYFAVCDANGQLLPYFIAVANGAIDETTVRKGNEAVLRARYEDAKFFYEMDTRKRFTEFRKQLKNILFHEKLGTMLDKMTRVENMVTELSCILDISEDVQQITRDAASLAMSDLSTAVVTEFTSLSGIMGRHYALRDGYSEQIAEALFEITLPRFSGDTLPESDAGIVLAIADRLDSLVGLFSAGCQPSSSNDPFGLRRISYGLVQLLVEKNKNLDFKKALELAAEVQSIKVDPHVIDDVLQFVTRRLEQFLIDKGVNAEFVRSILVERANFPCLAAKSAYKMEELSRGDLFFKVVEAYSRPTRIVRGKEDELHTEVDEAAFVTNEERVLWNTFLSVKKSINPGLEIDDFVETSCQLIQPLEDFFNNVFVMVDDDKIRVNRLTLLKGIADLPKGIADLTVLPGF* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0514 504 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 174 466 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Pvu10g0514 504 Pfam Glycyl-tRNA synthetase beta subunit 2 366 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Pvu10g0514 504 PRINTS Glycyl-tRNA synthetase beta subunit signature 61 76 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Pvu10g0514 504 PRINTS Glycyl-tRNA synthetase beta subunit signature 132 148 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Pvu10g0514 504 PRINTS Glycyl-tRNA synthetase beta subunit signature 211 230 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Pvu10g0514 504 PANTHER GLYCYL-TRNA SYNTHETASE 2 504 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Pvu10g0514 504 SUPERFAMILY HD-domain/PDEase-like 151 300 - -
Pvu10g0514 504 TIGRFAM glyS: glycine--tRNA ligase, beta subunit 5 501 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0514 K14164 - pvu:PHAVU_010G049400g 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0514 10 7792266 7802399 Pvu10g0514 10 7792266 7802399 ECH