Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0500 ATGTGTCCATTGCTGTTGTTTTCTTTGGTGTTTTTGAGCCAACTCATGGGTGGCTTCAACACACCATTGCCACCTCCATCTTATGGAGATCACGTATCCATTCTCAGCATTGATGGTGGTGGCATCAGAGGAATTATTCCAGCAACTGTTCTTGAGTATTTGGACAAGGCTCTTAAGGAAAAAGATCCAACAACATCGTTGGCACATTATTTTGATGTGATATCAGGAACAAGCACTGGTGGACTCATGAGTCTTATGTTAGCAGCTCCGAACTCATCTGACATTAAACGTCCTCTCTTTACTCCATCGCAAGTGGTGCAATTCTACAAGATATATGGCCCTCAAATATTTAAACCTAGAGCTTGGTATGATCTTCAAAAATGTCCCAAGTACGATGGAAAGTTCTTAGAATACAAAACAGGTGAGTTATTGAAAAAACTGAGACTGAGTGAGACATTGACGAACGTAGTAATACCAACTTTTGACCAGAAGAAAAACAACCCAGTTATATTCTCAAACTTCAAGGTGAAGTCAGAACCTTACTTGAATGTGAAACTCTCAGACATAGGTCTGGGAACTTCTGCTGCACCAACTTATTTTCCATCCCACCGCTTTCAGAACGATCAAGTTCAATTTGATTTGGTTGATGGTGCTCTGTCTGCTAACAATCCTGCCCTGGCTGCTGTGAGTGAAGCGATACAACACAGTGGGCAAAAGGAAATTATGTTGCTGTCATTAGGAACTGGAAGAACAAAAGCTGAAGACAAGTTAGGTAACATCATCTTTGAAGGTTTCTGCATGGTTTCATGGCTAGCTACACACGTGGAAGTTGTTAGTGAAGTTCTATACAGTACAGACATGACTCATTACTACCTTGCCACAATCTTCCCTGGTCTCTTACCTGCAGATAACTATCTTCGAATTCAGGAGTATAACATGGATCCATCCATAGCAGCCATGGATAATGTTGAGGAAGAGAACATGTATAACCTTGAAAAGGTAGGAAATGAACTGTTGCTCCAAAATGTTAAGAGGATGAATGTGAATACATTTGTTCCATTTGAACTAAACCAAACAAATGCTCAAGCTCTTGACAGGTTTGCTGAGGAATTATATGCAGAGAGGCAATTGCGTCTGAAAAGGAAATATATGGAGAATGGAGGAAGACCTCTCATTGAAAGTGTTTAA 1188 0.404 MCPLLLFSLVFLSQLMGGFNTPLPPPSYGDHVSILSIDGGGIRGIIPATVLEYLDKALKEKDPTTSLAHYFDVISGTSTGGLMSLMLAAPNSSDIKRPLFTPSQVVQFYKIYGPQIFKPRAWYDLQKCPKYDGKFLEYKTGELLKKLRLSETLTNVVIPTFDQKKNNPVIFSNFKVKSEPYLNVKLSDIGLGTSAAPTYFPSHRFQNDQVQFDLVDGALSANNPALAAVSEAIQHSGQKEIMLLSLGTGRTKAEDKLGNIIFEGFCMVSWLATHVEVVSEVLYSTDMTHYYLATIFPGLLPADNYLRIQEYNMDPSIAAMDNVEEENMYNLEKVGNELLLQNVKRMNVNTFVPFELNQTNAQALDRFAEELYAERQLRLKRKYMENGGRPLIESV* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0500 395 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 229 IPR002641 GO:0006629
Pvu10g0500 395 PANTHER XYLOSE ISOMERASE 4 386 - -
Pvu10g0500 395 Gene3D Cytosolic phospholipase A2 catalytic domain 26 384 - -
Pvu10g0500 395 Pfam Patatin-like phospholipase 35 228 IPR002641 GO:0006629
Pvu10g0500 395 SUPERFAMILY FabD/lysophospholipase-like 32 354 IPR016035 -
Pvu10g0500 395 PANTHER PATATIN 4 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0500 Pvu-Chr10 7462230 7465929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0500 21 381 Miscellaneous Gene Families AT2G26560 39.899 1.34e-82 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0500 - - gmx:100802647 575.089