Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0499 ATGTCTCTATTTTCCTTATTCTGTTTGGTGCTTGTTAGCCAATTGATGGCTGGATTCAGTTCATCAATACCACCTCCATCCTATGGAGATCATTTATCTGTTCTCAGCATAGATGGTGGTGGTATCAGGGGGATTATTCCTGCAAGTGTTCTTGATTACTTAGACAAGGCTCTTAAGGCAAAGGATCCAACAACATCATTGGCACATTACTTTGATGTGATATCAGGAACAAGTACTGGTGGACTCATGACTGCTATGTTAGCAGCACCAGACTCACCTGATTCCAATCAACCTCTCTTCACTCCATCAGAAGTAGTAAAGTTCTACAAGAAATATGGCCCTGAAATATTGAAATCTAGACCTTGGTATGATCCTAACAAATGTCCCAAGTATGATGGAGTGTTCTTGAGAAATATAACTCGTCAGATATTGAAAGATACACGACTGAATCAAACGTTGACGAACGTGGTTATACCATCTTTCGATGAGAAGAAAATCAACCCAGTTGTGTTCTCAAACTTCAAGCTGAAGACAGAAACTTATCTGAATGCCAAACTCTCAGATATATGCTTAGCCACTTCAGCTGCACCTACTTTTCTGCCACCCCACCAATTTGTGAATGATGGTGTTGAATTTGATATGATTGATGGAGCTATGGCTGCTAATAATCCAGCTATGGTGGCTGTGAGTGAAGTGATACAACACACTGATGAGGAGAAAGAAATCCTGTTGCTGTCATTAGGAACTGGAACAACAAAAAGTAGCAAGTTAAATGGCATTTTTGATGGTGTTTGTCAAATTGGATGGCTAATTAACAGCATTGATGTTGTTAGTGAGGCTTTATACAGTACAAACATGATCCATTACTACCTTGCCACAGTTTTCCCTGGTCTCTTGCCTCAGGATAACTATCTTCGAATTGAGGAGTATAACCTTGATCCATCACTGGAAGCAATGGATGATGCCTCACCAAAAAACATGGATAAGCTTGAGAAGACAGGAAAGAACTTGTTGAACCAAAACGTTTTCAGGATAAACATTAATAGTTTTGCCCCAGTTCAACTCAACCAAACAAATGCTCAAGCTCTTGACAGGTTTGCTGAGAAACTGTATGCTGAGAGGCAGTTGCGTCTGAAAAGGAAATCTATGGAAATGGGAGGAAGACCATTTATTGGAACTGTTAAAGCCAAATCCAACCGAATCTCAGCAACTTAA 1215 0.4 MSLFSLFCLVLVSQLMAGFSSSIPPPSYGDHLSVLSIDGGGIRGIIPASVLDYLDKALKAKDPTTSLAHYFDVISGTSTGGLMTAMLAAPDSPDSNQPLFTPSEVVKFYKKYGPEILKSRPWYDPNKCPKYDGVFLRNITRQILKDTRLNQTLTNVVIPSFDEKKINPVVFSNFKLKTETYLNAKLSDICLATSAAPTFLPPHQFVNDGVEFDMIDGAMAANNPAMVAVSEVIQHTDEEKEILLLSLGTGTTKSSKLNGIFDGVCQIGWLINSIDVVSEALYSTNMIHYYLATVFPGLLPQDNYLRIEEYNLDPSLEAMDDASPKNMDKLEKTGKNLLNQNVFRININSFAPVQLNQTNAQALDRFAEKLYAERQLRLKRKSMEMGGRPFIGTVKAKSNRISAT* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0499 404 PANTHER PATATIN 3 388 - -
Pvu10g0499 404 PANTHER XYLOSE ISOMERASE 3 388 - -
Pvu10g0499 404 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 229 IPR002641 GO:0006629
Pvu10g0499 404 Pfam Patatin-like phospholipase 35 228 IPR002641 GO:0006629
Pvu10g0499 404 SUPERFAMILY FabD/lysophospholipase-like 33 353 IPR016035 -
Pvu10g0499 404 Gene3D Cytosolic phospholipase A2 catalytic domain 26 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0499 Pvu-Chr10 7424413 7427704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0499 21 377 Miscellaneous Gene Families AT2G26560 40.409 9.58e-81 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0499 - - gmx:100802647 594.734