Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0497 ATGATAACTATTCTGACCGTTGATAGTGGTGGTATCAAGGGGATTATTCCAGCAAAAGTTCTTGATCACTTAGATAAGGCTCTTAAGGCTAAGAATCCAAATGCAGATATAGCACATTATTTTGACGTGATAGGAGGGACTAGCACTGGTGGACTCATGACAGCTATGTTAGCCACCCCAAGCCCTCAGAATCCTAATCGTGCTGCCTTTAGTCCTGCACAAATTGTAGACTTCTACAAACAAAATGGCCCTAATATATTCAAAGCATCTGG 272 0.4154 MITILTVDSGGIKGIIPAKVLDHLDKALKAKNPNADIAHYFDVIGGTSTGGLMTAMLATPSPQNPNRAAFSPAQIVDFYKQNGPNIFKAS 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0497 90 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 5 90 IPR002641 GO:0006629
Pvu10g0497 90 PANTHER PATATIN 2 88 - -
Pvu10g0497 90 PANTHER XYLOSE ISOMERASE 2 88 - -
Pvu10g0497 90 Gene3D Cytosolic phospholipase A2 catalytic domain 1 90 - -
Pvu10g0497 90 SUPERFAMILY FabD/lysophospholipase-like 2 88 IPR016035 -
Pvu10g0497 90 Pfam Patatin-like phospholipase 5 71 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0497 Pvu-Chr10 7372206 7372564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0497 1 87 Miscellaneous Gene Families AT2G26560 48.864 3.48e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0497 - - pvu:PHAVU_010G0478001 182.956