Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0491 ATGGCGGAAGTGAAGTTTTTTTTCACAAATTTTCCTCATGAGTACGCGGAAAGGGACATGTGGAAGATTTTTCAAAGGTGGGGAAGGGTCGCCGACGTCTTTATTTTAAGAAGACTCAACTCCGGAAACCGGCGTTTCGGGTTTGTGAGTTTTCAAGGGGTGGTGGATGCACACGCTTTAGAGAGGAGGCTTGATGCTATTTGGATTGGGCTTTGGAAGTTGCGGGTAAATCTACCTAAGTTTAGGAGGAAGGAAACACTCAAACCTGAGGTGGGTGGCAGAAGGAAGCATGAACAGGTAAGGAAGACTTGGAGGCAGAAGAATCAACAAAGAACATTTGCTCAGGTGGTTAGGGACGGAGATGAGTCTGCCTCTAAGAAGGTCCAGAACGCGAGTATGGATTGCTTCCAAGTTGTAGTAGAGTCTACAAAGTGGTTGGAGGAGTGTTTTGTAGGGAGACTTATTGAGTTAAAAAATGTGATGTCCATTAAGGAAAGTTTTATGTTGTGTGGTTTTAATTCAGTGAAGTTGAGGTCCTTAGGGGAGAAGTTTGTGTTGTTATCCTGTGATGAACTGGGAGTGTTAGAGAAGATAGTTGCTGGAAACAAAGACTTGTTAGATGGAATTTTCGAGTCTCTCGTCCCTTGGGATGCTAGTTCTGTGGTTGATGAAAAATTCGTTTGGGTCCGATGTAGGTGTTTCGAAACTATTGGGTCTCTTGTTGGTTCGTTAGTAGAGATTGACGAGGCCACGATAACAAGGGAGGTGGTCGAGTTTGCTCGGTTGCGTGTCAGAATCCCGATAGGAAGTGTGGAAAAGTTGGTAAAGCAAGTGCAGATTAATGGCAAGTTATGCAACGTATCCTTTGAAGAAGAGTTAGAGGTTCCGGTTGCCATGCAGAGGCTCCTTGATCGTCAATGGGGAGTGGTTTGTGAGGAAGAATCCAAAGCAAGCTTAGTTGAATTCGGAGGAGTTGGGTCTGTTAATTCTCTAGACTCGGAGCTTGGCGAAGGCTTGCTAGATGGTGAAGGTGGCGCATGCAAATACAATCATTGCGGAAAGAGTCAGTCTATGCTAGGTGAAGTAGGTGCTATGTGTAATTCTGGGGTAAATCTGTCCAACTTGGATTATGATTTTTCCTACTTTGGTAACCCAATAGTTTTTTCAAAAAAACTAGAGGAGAGCATTAAAGTTAGTGGGGCCCAGTCAGGTGGTTGTGCAGAAAAGAATATTGGTCTTAATGACGCATTAATTTCTCAGGAGAAGGAATGGTTTGATGACCTAATTTGTGTTGGGCCTATTCTGGCCCAAGAAAGACACGCGTCTAGGGTTGGGACTGAGTCAGCGGTGGCGGCGGCTGCCACGTGCGTTGTCACAGAGGAGCTTGCAAGCGTAGAGGCGATGCGGTCTGCGGTGGTTGGCGGTAAGGAGGCGTCGCGACCTATAGTGGTTGGCGGCGAAGAGGTGTCGCGGCCTGCACTGGTTGGTTGCGGTTCTGGTGGATGGTCCGCTTGTTTAAACGGAAGGTTATCACCGTCCGATAGGGGCGTTCGCGGAGCAGCGCTGTCCAGCGGTGGAGTTCTTTATGTGGACTTGAGTGCAGCGGCAGGTGGCAGTCTTGTGTCCACGCCGTCGTCGGCAATTGGTGCCAATTCGATCGACGAAGTCGGAAGATTGGGGTGGAGCGGAGACATAGGAGGTTGTGAGGGTGCGAGTATGGTGAATGGGAGGGAAGATGAAGTAGGTCAGCAGTTCAGTAGTGCGGTGGCGGACGGTCGGAGGAGTTTAAATGGAAGTGAAAACAAGGTCTCGAATCCTTCTTATTCAATCAATGGTGTGACCCGTCAAATGGATGGAAGCTTTGTAAGTCGCGAGTTCAACTGTGTCCCTTTGGTCAATTTTAGAGGAACAGGCTCACAACCTCGAGCTTTGTTGGACGTTAATGTTAGTCGTGAGTCCTATGTTCCTCTCAGCCGAAGCATCGACAGTGCTGTCCAATATGGATCTAGGCTTAATCGATTGAAAAACGATAACTTTGAAGCTGCTAGAATGTGGAGCATAGGAAAGGAACTCGGGTTCTCCTTTATTGGTGACGAGGAAATTGTTATTAGCAAGTTAAAATCTTCGGAAAATCGAGACAGCGGTAAGCAGAAAGTTGTTGGGAAGGAGAGCAGTGTTTCAGATGATGAAGGTTGTTAG 2199 0.472 MAEVKFFFTNFPHEYAERDMWKIFQRWGRVADVFILRRLNSGNRRFGFVSFQGVVDAHALERRLDAIWIGLWKLRVNLPKFRRKETLKPEVGGRRKHEQVRKTWRQKNQQRTFAQVVRDGDESASKKVQNASMDCFQVVVESTKWLEECFVGRLIELKNVMSIKESFMLCGFNSVKLRSLGEKFVLLSCDELGVLEKIVAGNKDLLDGIFESLVPWDASSVVDEKFVWVRCRCFETIGSLVGSLVEIDEATITREVVEFARLRVRIPIGSVEKLVKQVQINGKLCNVSFEEELEVPVAMQRLLDRQWGVVCEEESKASLVEFGGVGSVNSLDSELGEGLLDGEGGACKYNHCGKSQSMLGEVGAMCNSGVNLSNLDYDFSYFGNPIVFSKKLEESIKVSGAQSGGCAEKNIGLNDALISQEKEWFDDLICVGPILAQERHASRVGTESAVAAAATCVVTEELASVEAMRSAVVGGKEASRPIVVGGEEVSRPALVGCGSGGWSACLNGRLSPSDRGVRGAALSSGGVLYVDLSAAAGGSLVSTPSSAIGANSIDEVGRLGWSGDIGGCEGASMVNGREDEVGQQFSSAVADGRRSLNGSENKVSNPSYSINGVTRQMDGSFVSREFNCVPLVNFRGTGSQPRALLDVNVSRESYVPLSRSIDSAVQYGSRLNRLKNDNFEAARMWSIGKELGFSFIGDEEIVISKLKSSENRDSGKQKVVGKESSVSDDEGC* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0491 732 SUPERFAMILY RNA-binding domain, RBD 6 126 IPR035979 GO:0003676
Pvu10g0491 732 PANTHER RNA RECOGNITION MOTIF 5 298 - -
Pvu10g0491 732 CDD RRM_SF 7 77 - -
Pvu10g0491 732 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 5 298 - -
Pvu10g0491 732 Gene3D - 2 117 IPR012677 -
Pvu10g0491 732 MobiDBLite consensus disorder prediction 707 732 - -
Pvu10g0491 732 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 81 IPR000504 GO:0003723
Pvu10g0491 732 SMART rrm1_1 5 77 IPR000504 GO:0003723
Pvu10g0491 732 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 65 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0491 Pvu-Chr10 7279187 7281474 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0491 - - pvu:PHAVU_010G047300g 1434.08