Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0488 GCATGGGATAAAAGTGCAACACTGGCAAAGTATTTTGATGTGATAGCAGGGACTAGCACAGGAGGACTCATGACTGCTATGCTAACTACTCCTCACCCAGATGACCCCACTCGTCCTCTCTCCACTGCCACTGAACTCATAGATTTCTATAAAACATATGGCCCTTCTATATTCAATGAAACTAGGGGGTGGAATAATGCATTCCCAGGTCCTAAGTATGATGGCAAGTTCTTGCATTACATAGCACGTGACTTATTGCGAAATACAAGAGTCAGCCAAACACTCACAAATGTTGTGATTCCAACCTTTGACGTTAAGAAGCTTCACCCTGTTATATTCTCAAACTTTCAGCTTAAGGAAGTTCCTAGCTTTGATGCGAAACTGTCAGATGTATGCATTGGAACCTCAGCTGCACCAACCTATCTACCACCATATTATTTCCAAAATGATGGCACTGAGTTCAATTTGATTGATGGTGGAGTTGCAGCCACTAATCCGGCTATGGCTGCTGTGACAGAAGTGATAAAGCAACAGAAGGAGAAGAATCCTGAAATGACTCCAAAGAATTCAAATGAAAATACCAAAATCCTGTTGCTGTCTATAGGATGTGGAACTGTAAAAACTGTTGGGTATGATGCTGAAGTTGCAGAACAGTTCTCAGCAGCTGTTTGGGCAACTTCAGGGCTTGCAACTGGTGCTTATGATTATGCTTCCAAAGATATGACTGAGTTTTACATTTCCACTGTCTTCCCTGGCCTCCAATCTTCAGACTACTACCTTCGAATTCAGGATTATAACTTGGATCCATCCATGGATGCCCTTGACAATGCCACTGCTGTGAACATGGAAAATCTTGTAAAGGTTGGGCAGAAGCTGCTGGAAGAACCAGTTTTGAAGATGAATGTGGCTACTTTTGTCCCAGAGGAAGATGTAGAATGGGGTACAAATGCTAAGGCTCTTGAAAGGCTGGCTGAAGTTCTGTACAGAGAGAAAAAGCTTCGTTCTATGAGAAAGAAATCGATGGAAAAAATGGGACGACCATTTATTCAAAATGTTGTTGGGAAATCCAAACAAGTTATTACGAATGCATGA 1092 0.4203 AWDKSATLAKYFDVIAGTSTGGLMTAMLTTPHPDDPTRPLSTATELIDFYKTYGPSIFNETRGWNNAFPGPKYDGKFLHYIARDLLRNTRVSQTLTNVVIPTFDVKKLHPVIFSNFQLKEVPSFDAKLSDVCIGTSAAPTYLPPYYFQNDGTEFNLIDGGVAATNPAMAAVTEVIKQQKEKNPEMTPKNSNENTKILLLSIGCGTVKTVGYDAEVAEQFSAAVWATSGLATGAYDYASKDMTEFYISTVFPGLQSSDYYLRIQDYNLDPSMDALDNATAVNMENLVKVGQKLLEEPVLKMNVATFVPEEDVEWGTNAKALERLAEVLYREKKLRSMRKKSMEKMGRPFIQNVVGKSKQVITNA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0488 363 Gene3D Cytosolic phospholipase A2 catalytic domain 2 340 - -
Pvu10g0488 363 PANTHER PATATIN 2 345 - -
Pvu10g0488 363 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 1 171 IPR002641 GO:0006629
Pvu10g0488 363 SUPERFAMILY FabD/lysophospholipase-like 8 304 IPR016035 -
Pvu10g0488 363 Pfam Patatin-like phospholipase 9 170 IPR002641 GO:0006629
Pvu10g0488 363 PANTHER XYLOSE ISOMERASE 2 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0488 Pvu-Chr10 7221616 7224703 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0488 8 343 Miscellaneous Gene Families AT4G37060 44.318 9.45e-89 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0488 - - var:108346793 598.586