Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0487 ATGGCTGCTTTTCTTTTGCTTTTTCTGGTGTTTTCTTCTCAGTTGATTGGTGGAATGAATGCACAGCTTCCATCTTCAGCCTATGAAAACATCATCACCATTCTCAGCATAGATGGAGGTGGCATTAGGGGTCTGGTTCCTGCTGTAGTTCTTCAGCACTTGGAAAAGTCTCTTCAG 177 0.435 MAAFLLLFLVFSSQLIGGMNAQLPSSAYENIITILSIDGGGIRGLVPAVVLQHLEKSLQ 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0487 59 Gene3D Cytosolic phospholipase A2 catalytic domain 20 59 - -
Pvu10g0487 59 PANTHER PATATIN 1 59 - -
Pvu10g0487 59 PANTHER XYLOSE ISOMERASE 1 59 - -
Pvu10g0487 59 SUPERFAMILY FabD/lysophospholipase-like 31 57 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0487 Pvu-Chr10 7215459 7215665 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0487 23 59 Miscellaneous Gene Families AT2G26560 64.865 1.93e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0487 - - pvu:PHAVU_010G0470001 106.301