Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0483 ATGGCAGCGCTGATTTCCAAAAGGCTACTACGTTGTTCTTCTGGGTCCTTGCCTTCACTAGGACGAAGCTACTTTAATTTACCAAATGCTGGGTCTGCCTCTCTTTATAACTCACGTGATGTACACAGCAGAGTATCTGGGGAAAGACTTCTTTCTGCAAATTGTTCTTTGGTCAGGTCAATGATCCGACAGTTTTCTACTTCTATTTTAACTCCTGGATCTGATGAGGGTGCATTTCCGTCTGATTTATTGTCCAAGAATACTCTAGCAACATCTGAGCGTACTATAGGGCTTTGCCAGGATCTTTTAATTCCAGTTACCAACTTTCATAATGAAAACAAGGGCTTTATGGTTTTACCTGGAGATGTTTTTGATTTGCCTATTCGGAAGGACATTATTCATCGTGTCGTTAGGTGGCAGCTTGCAAAACGACAACAGGGGACTCATTCAACAAAAACTATCAGTGAGGTCAGTGGGACTGGGAGAAAGCCTTGGAATCAAAAGGGAACTGGTAAAGCAAGGCATGGTACATTGCGTGGGCCTCAGTTTAGGGGTGGTGCCACCATGCATGGCCCTAAGCCTCGAAGCCATGCTTTCAAAGTCAATAAGAAGGTTCGGCGTCTGGGGCTAAAGATTGCCTTGTCAGCTCGTGCAGCAGAAGGAAAGCTTCTTGTCTTTGAGGATCTGGAGGTTCCCACACATAAAACTAAGAACATGGTGAATTATTACAATCAAATGGAGAAAACCAAGAAACTTCTGCTTGTAGATGGTGGGCCTATAGACGAAAAGTTAAAATTATCTACACAAAATCTACACTATGTTAACATACTTCCCTCCATTGGTTTGAATGTCTACAGCATTTTGCTGCATGACACGTTGGTGATGTCCCGATCTGCGGTGACCAGAATTGTTGAGCGAATGCGCACTCCAATAAATCGTTGA 942 0.4342 MAALISKRLLRCSSGSLPSLGRSYFNLPNAGSASLYNSRDVHSRVSGERLLSANCSLVRSMIRQFSTSILTPGSDEGAFPSDLLSKNTLATSERTIGLCQDLLIPVTNFHNENKGFMVLPGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGKARHGTLRGPQFRGGATMHGPKPRSHAFKVNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTKNMVNYYNQMEKTKKLLLVDGGPIDEKLKLSTQNLHYVNILPSIGLNVYSILLHDTLVMSRSAVTRIVERMRTPINR* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0483 313 SUPERFAMILY Ribosomal protein L4 104 307 IPR023574 GO:0003735|GO:0005840|GO:0006412
Pvu10g0483 313 TIGRFAM rplD_bact: 50S ribosomal protein uL4 119 304 IPR013005 -
Pvu10g0483 313 MobiDBLite consensus disorder prediction 150 165 - -
Pvu10g0483 313 Hamap 50S ribosomal protein L4 [rplD]. 109 308 IPR013005 -
Pvu10g0483 313 Pfam Ribosomal protein L4/L1 family 119 305 IPR002136 GO:0003735|GO:0005840|GO:0006412
Pvu10g0483 313 PANTHER 50S RIBOSOMAL PROTEIN L4 46 312 IPR013005 -
Pvu10g0483 313 MobiDBLite consensus disorder prediction 150 196 - -
Pvu10g0483 313 Gene3D - 86 312 IPR023574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0483 Pvu-Chr10 7146537 7151772 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0483 K02926 - gmx:100804238 545.814