Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0480 ATGGCAGCAACCACAGAGATTGAGAAGAACAGTATAGAAGAGGAAGCGGAACAAGTGGTGAATCCATGGGAGGTTTCTTCAAAAGGAAAAATCGATTACGACAAACTCATTGACCGTTTCGGTTGCCAGAAGCTCGACGATGCTCTCATTTCGCGTATCGAACGCCTCACCTCGCGCACTCCTCACGTCTTCCTACGACGCCGCGTTTTCTTCGCCCACCGCGATGTCGCCGAGATTCTGGATGCGTACGAGAGAGGCGATAAGTTTTACTTGTACACCGGACGCGGGCCTTCCTCCGAAGCGTTGCACTTGGGACATTTGATTCCCTTCATGTTCACTAAGTATTTGCAAGATGTGTTTAAGGTTCCTCTGGTTATACAGCTCACTGATGATGAAAAGTTCTTCTGGAAAAATCTTACTGTAGAGGAGTGCCGAAGACTTGCAAGGGAGAATGCAAAGGACATCATTGCTTGTGGTTTTGACATTTCAAAGACGTTCATCTTCTCTGATTTTAATTATGTTGGCGGTTCCTTCTACAAGAACATGTGTGAGGTTGCAACACGTGTAACTTATAACCAGGCTGTTGGCATCTTTGGGTTTGCTGGGGAAGATCATATTGGAAAAGTTAGTTTTCCTCCTGTGCAGGCAGTTCCATCATTTCCCAGTTCATTTCCTCACCTATTTTCTGGAAAAGAGAATCTCCGCTGTTTAATTCCTTGTGCAATTGACCAGGATCCATATTTTAGAATGACACGTGATGTTGCTCCTCGAATGGGTTTCAACAAGCCAGCCTTGATTGAATCAATATTCTTCCCTGCATTACAGGGGGAAACAGGAAAAATGTCTGCCAGTGATCCCAATTCTGCCATATATGTGACTGATTCCGCAAAAGATATAAAGAACAAGGTAAACAAGCATGCATTTTCGGGTGGGCAAGATTCTATTGAGAAGCATAGGCAATTGGGGGCAAATCTTGAGGTAGATATACCAATCAAATACCTATCTTTTTTCTTAGAAGATGATGCTGAACTTGAGCACATTAAGAAGGAATATGGAGAAGGGCGCATGCTAACTGGTGAGGTAAAGCAACGGCTAGTTCAAGTCTTGACTGAAGTAGTGGAGAGACATCGTAGGGCTCGGGCTTCTGTGACTGAAGAGATGGTGGATGCATTTATGGCTGTCAGACCACTTCCCCACATGTTTGACTGA 1209 0.4458 MAATTEIEKNSIEEEAEQVVNPWEVSSKGKIDYDKLIDRFGCQKLDDALISRIERLTSRTPHVFLRRRVFFAHRDVAEILDAYERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDVFKVPLVIQLTDDEKFFWKNLTVEECRRLARENAKDIIACGFDISKTFIFSDFNYVGGSFYKNMCEVATRVTYNQAVGIFGFAGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKENLRCLIPCAIDQDPYFRMTRDVAPRMGFNKPALIESIFFPALQGETGKMSASDPNSAIYVTDSAKDIKNKVNKHAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLEDDAELEHIKKEYGEGRMLTGEVKQRLVQVLTEVVERHRRARASVTEEMVDAFMAVRPLPHMFD* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0480 402 PANTHER TRYPTOPHANYL-TRNA SYNTHETASE 12 402 - -
Pvu10g0480 402 PANTHER BNAA01G33520D PROTEIN 12 402 - -
Pvu10g0480 402 SUPERFAMILY Nucleotidylyl transferase 17 395 - -
Pvu10g0480 402 Pfam tRNA synthetases class I (W and Y) 87 372 IPR002305 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu10g0480 402 PRINTS Tryptophanyl-tRNA synthetase signature 102 118 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Pvu10g0480 402 PRINTS Tryptophanyl-tRNA synthetase signature 154 173 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Pvu10g0480 402 PRINTS Tryptophanyl-tRNA synthetase signature 236 257 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Pvu10g0480 402 PRINTS Tryptophanyl-tRNA synthetase signature 280 290 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Pvu10g0480 402 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 97 107 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu10g0480 402 Gene3D - 284 401 - -
Pvu10g0480 402 TIGRFAM trpS: tryptophan--tRNA ligase 88 393 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Pvu10g0480 402 Gene3D HUPs 8 283 IPR014729 -
Pvu10g0480 402 CDD TrpRS_core 90 371 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0480 K01867 - gmx:100787194 757.673