LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu10g0478	ATGACCACAACCAGGGCTCGAGTTAGTAGCTTCTCCCGCAATGTGTCAACTGTGACATCTCAGAATCCTGGACTTAAGCATGGCCCTAATGGGACAATGCTCATTTCATCTGGGATTCCTGATCTTGACAAGATTTTAGGTGGTGGTTTTCCATTGGGTAGCCTTGTCATGGTTATGGAAGATGAAGAAGCACCTCATCATATGCTTTTATTGAGAAATTTTATGTCTCAAGGACTTGTACAAAAGCAACCACTTTTGTATGCTAGTGCATCCAGAGATCCTAAAAGATTTCTTGGTACTTTGCCTAGTCCGGCATCACCCAAAGGGGATAAATCTTCAGATCTTAGCCATGAGAAGGATATAAGAATTGCTTGGCAATACAAGAAGTACTTTGGTGAGCCTCAGCTAAATCTCAACTCTAATAATGGTGGTCAGCAGGATTACTGTAACGATTTTGATTTGAGGAAGCCCCTGGATCGGCATTTGTTTAGTGGCAACAATGTAGATTGTGTTAGCATCAAAGATTCTCCGAACCTTAGTTCTCTTCAAGACCAATGTGCTGGATTTCTGGCTAAACTCTCAAGAAATGAAGGCAACATTTCCTCTGCTGGTCGTATTGCAATTCAATCATTCTGTTCTCCACAATGCAAGTATTCAAATGAGGAGTGGCATATGCTTTCCTTTATTAGGTCCCTAAAGAGCATGACCCAGTCTTCAAACGCTGTTGTTGTTGTAACCTTTCCACCTTCACTTCTTTCTCCATCTTGTTCACTAAGATTGCAGCATATGGCAGATACCTTACTTTCTGTCAGAGCCATTCCAGATGAGGACAAGGAACTGGCAAAACTCCTCACTGGTTACCAGGATATGATTGGGCTTTTAAACGTACACAAAGCTGCACGGTTAAATACACAGGTTCCAGTGATTCTGGAGGCTACAACGTTCTCAATAAAATTGCACAAACGGAGGTTTTTGGTCTTAGAATGTCTAAATCAAGCCCCAGTTGACGGATCAAGTGGAAGTTCATATGGCACATCTGGCGGTTGTTCTGGGTCAACTAAAGTTGGGACACTTGATTTTTAG	1083	0.4211	MTTTRARVSSFSRNVSTVTSQNPGLKHGPNGTMLISSGIPDLDKILGGGFPLGSLVMVMEDEEAPHHMLLLRNFMSQGLVQKQPLLYASASRDPKRFLGTLPSPASPKGDKSSDLSHEKDIRIAWQYKKYFGEPQLNLNSNNGGQQDYCNDFDLRKPLDRHLFSGNNVDCVSIKDSPNLSSLQDQCAGFLAKLSRNEGNISSAGRIAIQSFCSPQCKYSNEEWHMLSFIRSLKSMTQSSNAVVVVTFPPSLLSPSCSLRLQHMADTLLSVRAIPDEDKELAKLLTGYQDMIGLLNVHKAARLNTQVPVILEATTFSIKLHKRRFLVLECLNQAPVDGSSGSSYGTSGGCSGSTKVGTLDF*	361

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu10g0478	360	MobiDBLite	consensus disorder prediction	1	30	-	-
	Pvu10g0478	360	Gene3D	-	17	336	IPR027417	-
	Pvu10g0478	360	MobiDBLite	consensus disorder prediction	1	27	-	-
	Pvu10g0478	360	MobiDBLite	consensus disorder prediction	341	360	-	-
	Pvu10g0478	360	PANTHER	PAX6 NEIGHBOR PROTEIN PAXNEB	2	360	IPR008728	GO:0002098\|GO:0033588
	Pvu10g0478	360	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	35	276	IPR027417	-
	Pvu10g0478	360	Pfam	PAXNEB protein	19	360	IPR008728	GO:0002098\|GO:0033588

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu10g0478	Pvu-Chr10	6955267	6961294	Proximal

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu10g0478	K11375		-	gmx:100799237	632.484