Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0460 ATGTATGGCGGTGATGAAGTATCAGCTATAGTATTTGACTTGGGTTCACACACATGTAAAGCTGGTTATGCCGGTGAGGATGCTCCCAAGGCCGTATTTCCGTCTGTTGTTGGAGCAATTGATCAAATGGATGTTGATGAAGCAGATGATGATGCCGAGAAGAACTCTGCCTCAGTTGGGGAATCAAAGAATAATCTTAGAAATGCTGATTCTGACAAGGCCAAGGGAAAGAGGAAATTGTTTGTAGGATCGCAGTCCTTGGGGTACCGTAGAGACTATATGGAGGTGCTGTCTCCATTTAAGGATGGAATTGTAGCTGACTGGGATATTGTTGATAGCATATGGGATCATGCCTTCAGGGAGTGCCTATTGATTGATCCTAAAGAGCATCCTATGCTCCTTGCTGAGCCTTCTTCAAACTCTCAACAGCAGAGAGAAAGGACAGCAGAGCTTATGTTTGAGAAGTACAAGGCACCTGCATTATTTTTGGCGAAGAATGCTGTTCTGACTTCCTTTGCATCAGGGCGTGCTACGTCATTAGTTGTTGATGGTGGTGGAGGGTCAACTACAATTGCACCAGTACACGATGGTTATGTTCTTCAGAAGGCTGTGGCAACCTCTCCAATTGGAGGAGAATTTCTTACAGATTGCTTGATGAAAAGCTTGGAAAGCAAGGGTATTACGATGAAACCACGTTATTCCTTTAGGAGAAAGGAAATACGCCCTGGAGAGTTTCAGACAGTAGATATTGATTTTCCAAATACAACTGAAAGCTACAAACTCTATTCGCAGAGGGTGATTGCCAGTGATATCAAGGAATGTGTGTGCCGTGCACCGGATACTCCTTATGATGAGAGTGCATATTCAAACATCCCAATGACCTCATATGAGCTTCCTGATGGCCAGACACTTGAAATTGGATCTGACAGATTTAAGATTCCAGATGTTCTTTTCAATCCATCCCTGGTTCAGTCAATTCCTGGCATGGAGAGCTTTGCTGAAATTGCTCCTTCAGTTCGTGGCCTTCCTCAAATGGTCATTGAAAGCATTAACAAGTGTGATGTAGACATTCGAAGAGAGTTGTTTAGTAGTATACTGCTTGCTGGTGGTACAGCTTCAATGCAACAACTAAAGGAACGGCTTGAGAAAGACTTGCTAGAGGAGTCCCCTCAAGCTGCCAGAGTAAAAGTATTGGCCAGTGGGAATGCTACTGAAAGAAGGTTTAGTGTTTGGATAGGGGGTAGTATATTGGCATCTCTTGGCTCCTTCCAGCAAATGTGGTTCTCCAAATCCGAGTATGAAGAGCATGGAGCTTCATATATCCAAAGGAAGTGTCCATGA 1341 0.4385 MYGGDEVSAIVFDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDVDEADDDAEKNSASVGESKNNLRNADSDKAKGKRKLFVGSQSLGYRRDYMEVLSPFKDGIVADWDIVDSIWDHAFRECLLIDPKEHPMLLAEPSSNSQQQRERTAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDGGGGSTTIAPVHDGYVLQKAVATSPIGGEFLTDCLMKSLESKGITMKPRYSFRRKEIRPGEFQTVDIDFPNTTESYKLYSQRVIASDIKECVCRAPDTPYDESAYSNIPMTSYELPDGQTLEIGSDRFKIPDVLFNPSLVQSIPGMESFAEIAPSVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0460 446 Gene3D - 1 181 - -
Pvu10g0460 446 Gene3D - 182 385 - -
Pvu10g0460 446 PANTHER - 2 445 - -
Pvu10g0460 446 SMART actin_3 7 446 IPR004000 -
Pvu10g0460 446 SUPERFAMILY Actin-like ATPase domain 175 445 IPR043129 -
Pvu10g0460 446 MobiDBLite consensus disorder prediction 48 71 - -
Pvu10g0460 446 Gene3D - 391 446 - -
Pvu10g0460 446 Pfam Actin 4 445 IPR004000 -
Pvu10g0460 446 CDD NBD_sugar-kinase_HSP70_actin 101 205 - -
Pvu10g0460 446 Gene3D Actin; Chain A, domain 4 211 324 - -
Pvu10g0460 446 PANTHER ACTIN 2 445 IPR004000 -
Pvu10g0460 446 SUPERFAMILY Actin-like ATPase domain 5 182 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0460 Pvu-Chr10 6665968 6676655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0460 1 445 Miscellaneous Gene Families AT3G53750 36.161 4.54e-94 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0460 K11340 - gmx:100785066 829.706