Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0459 ATGCTTACTTGTGATGAATGGAGGTCTAGCAAGTTTGCTAAAATAAATGATGAAAAAATAGTTGAAGATGTGGGTGCATTGCCTCTAATTGAAGTGCTTCGATTGGTTGATTCGGATCAAAAACCAACCATGAGTTTCATTTATGAAGCAATGGACCAAGCTAAAGAGAAGATACAAAAAGCTTTCAATGATGTTAAAAAAAGCTATTTGCCTTTGTGGAATATCATTGATGAAAGGTGGGACAAACAACTTCATAGGCCTTTGCAAGCTGCCGACTATTTTCTTAACCCTCAAATGCATTATTGTCCTGGATTTAAAGCAGATTTGGAGGTGAAACGAGGTCTAATGGAATGCATAACTAGGATGGTGGAGGATGAGGATGAACAAACTCTCATTGATGTTCTAATTGATGATTTCAAAAAACGAGCAAAAAAATTTAATTATCCCATGGCTACTAGGTCAATCAATTTAAAGACTCCAACAGATTGGTGGGAGTCTTATGGTGATGAGTATACAGAACTCCAAAAGTTTGTCATTCATGTATTGAGCTTGACATGTAGCTCTTTCGGATGTGAGCGTAACTGGAGTTCCTCTGAGATGATA 603 0.3715 MLTCDEWRSSKFAKINDEKIVEDVGALPLIEVLRLVDSDQKPTMSFIYEAMDQAKEKIQKAFNDVKKSYLPLWNIIDERWDKQLHRPLQAADYFLNPQMHYCPGFKADLEVKRGLMECITRMVEDEDEQTLIDVLIDDFKKRAKKFNYPMATRSINLKTPTDWWESYGDEYTELQKFVIHVLSLTCSSFGCERNWSSSEMI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0459 201 PANTHER OS09G0499600 PROTEIN 16 201 - -
Pvu10g0459 201 PANTHER OSJNBA0013A04.12 PROTEIN 16 201 - -
Pvu10g0459 201 Pfam hAT family C-terminal dimerisation region 159 198 IPR008906 GO:0046983
Pvu10g0459 201 SUPERFAMILY Ribonuclease H-like 27 200 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0459 Pvu-Chr10 6661971 6662699 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0459 - - pvu:PHAVU_005G123000g 318.931