Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0445 ATGGCATCATCGGATGAAGAGGGTGAAATTATCCCAGATCTTGTTAATAGTTATTGGTTTGAAAATGCAAAGGAGGATTTTGTGTCACTTTCTAGTTTGACACTGTTGTTTAGCATCAGTGAGATCGAATGTGACTTGGGAGAAAAAGTATTTTTACGTGGCACCACTGATGATGGCCTGCAGAAAATTTACAAACAGATCATAGGATGGAGATTTGAACTTCCCTATGAGAAGCCTGAGATTTCGGTGCTTTCAAAGGACAAAAATTGGATAACACTCCAAAGACCAAGGAAGTGTTTTGAAAGTATACTTAGGACAATCTTGGTCACTATATATTGTTTACATTTTCTGAGATGGAATCCAGAGGAATCTCATATATCTATTTGGGGCAAAATGAAGAAGGCCTTTAGCACATTTGATATCATACCATCCGAGAATGATATTCTGTGTCATCTGAGTTTGATCAGAGAAGCGGTTAAAAGGGACAAAAATTTAACAAAATCAAAGGATGTTCTTCCTACAAAGAAACCAAAATTTATTGTGGACTCAGAGGATGAGGAGAAAGTCCAATCTGATGGCAAACTCAATCCAGATGGAGAGCAAAATATTGGATATGATACTGTTTGTTCAATATGTGATAATGGTGGAGAAATACTTCCTTGTGAAGGAAGCTGTTTGAGATCCTTCCATGCAACCAAAGAAGCTGGTATAGACGCATTTTGTGAATCCCTTGGCTACACCAGTGCTCAAGTTAAGGCCTTTCCAAACTTTTACTGTCAAAATTGTATGTACAAGCAGCACCAGTGCTTTGCATGTGGCAAATTGGGTTCATCTGATGCATCATCTACAGCAGAGGTATTTCCTTGTGTTACTGCAAATTGTGGGCACTACTACCATCCTGACTGTGTAGCAAGGCTTCTCTCCCCTGGCACTGACACTGAACAAGAGGAAATGAGAAAGAAAGTTGCCTTTGGCAAAGCATTTGTCTGTCCTCTTCATACATGTTCTTTATGCAAAAAGGGAGAAATTAAAAATGTTCATCATTTGCAGTTAGCAATATGTAGACGCTGTCCTAAAGCTTACCACAGAAAATGTTTACCCAAGGAAATTTCCTTCACATTTGATTATGATAAGGGCATTGAGCAGAGGGCTTGGGATGGTTTACTTGATCATCGAATTTTGATATATTGCATGAATCATGAGATAGATAGCAAACTCTGGACTCCTGCAAGAGACCATCTGCTATTTCCTGATATGAAAGTCCAAAGGAAGGTATTCAATTACAAATTATTTGACAAAGGAAAAGATACTATAAATTTGGATAAAAGTTTTGAAGATCTTCCAACTAAGGAAACATTGGTACCAAACTGGGTTGCAGAGCAAAGTGTTAGCATTAAAGATGGTGATGTTGTCAAAGATCTGGAGAAAATAAGTTGTAAGAAAGATATACGTTTCTCTAGTGCATTAGTCAAGTTTGATAGGGATAGAACATATTTGAAGGTAAAAAATATGCCTGTGTTGAATCATTCCTTACCAAGTCCTGCAAAAAGGTTACCTTTGAAAGTTGCTAACTTGTGTAATTCAAGATTAGATGAAGCTAAATCTCTGCAGAAAAAAATGGTCAGTGGAAGAATTGACAAAACTGGCTTTGGGAAGCCTCTAGTAAAAAAAATCCAAACATCGCTTGACTTTGATAATGCTGAAATGAAAAACAGTATCTTGTCTTTAATGAAAGAATCCATGTCTACGTTTAATGAGCAAGAATTCATTAAGAACCATCAAGCCTTCTCTACAACACCAGGTTTAACCGAAACTGAATTTCATAAGAACCTTACTCAAGGGAAAGTAGAAAGTTCAATTAAGGCTATTCAAACAGCTTTGCAGAGGTTAGAAGAAGGATGTAGTATTGAAGAAGCAAAAGCTATTTGTGATCCAGGGGTCCTGCATCAGCTTTTCATTTGGCAGACGCAGCTCAAGGTGTATCTTGCACCTTTTCTCCATGGCATGCGATATACTTCCTTTGGTCGCCATTTCACTAAAATAGACAAACTGAAGGAGGTTGTTAATAGGCTTCATTGGTATGTTCAGAATGGAGACACGGTTTTGGACTTCTGTTGTGGTTCTAATGACTTCAGTTGTCTAATGAAATCAAAGCTTGAACAGATGGGGAAGTCATGTTCATTCAAGAACTATGATTTATTCCAACCTAAGAATGATTTCAACTTTGAGAAGAGAGATTGGATGAGTGTCAATGCAGAAGAATTACCACACGGTTCTAAACTTATCATAGGGCTGAATCCTCCTTTTGGGGTGAAGGGTTGTCTTGCTAACAAATTTATTAACAAGGCATTGACTTTCAATCCAAAACTTCTTATACTAATTGTACCAAAGGTGACTAAACGACTTGACAAAAGGAAAGGTGGATATGATTTAATTTGGGAGAATGATGAAATGTTTTCAGGAAAGTCATTTTATCTACCTGGTTCTGTTGATGTGCGTGACAAGCAACTGGAAGACTGGAACTTGAAGCCACCACCTTTGTACCTTTGGAGTCACCCTGATTGGACCACTAAGCACAGAAAAATTGCTCAAAAACAGTGCCACATCAATGAAAAATATGATGTGCATGTGAAGAATTATCTTATGGAGGAGAATCATGACTGTTACCAGGACTACACTGGCTTGCATGCACCTGGTGATGTTTTGAGCATATTTGATGATATTCCATGTGATAATGATGATGGTGCAGATGAGGAAGTTGCAACCAGCAATGCTCTGGGAGAGGTGAAAGGAACAGTGTTTTCTGATTGTGGAGGAGAAATGGAAATGGAGTTACCCTTTGATGAAGCTGAGGAAATGTGTATTGATATGGAGTTATCAACTCCCTAG 2889 0.3808 MASSDEEGEIIPDLVNSYWFENAKEDFVSLSSLTLLFSISEIECDLGEKVFLRGTTDDGLQKIYKQIIGWRFELPYEKPEISVLSKDKNWITLQRPRKCFESILRTILVTIYCLHFLRWNPEESHISIWGKMKKAFSTFDIIPSENDILCHLSLIREAVKRDKNLTKSKDVLPTKKPKFIVDSEDEEKVQSDGKLNPDGEQNIGYDTVCSICDNGGEILPCEGSCLRSFHATKEAGIDAFCESLGYTSAQVKAFPNFYCQNCMYKQHQCFACGKLGSSDASSTAEVFPCVTANCGHYYHPDCVARLLSPGTDTEQEEMRKKVAFGKAFVCPLHTCSLCKKGEIKNVHHLQLAICRRCPKAYHRKCLPKEISFTFDYDKGIEQRAWDGLLDHRILIYCMNHEIDSKLWTPARDHLLFPDMKVQRKVFNYKLFDKGKDTINLDKSFEDLPTKETLVPNWVAEQSVSIKDGDVVKDLEKISCKKDIRFSSALVKFDRDRTYLKVKNMPVLNHSLPSPAKRLPLKVANLCNSRLDEAKSLQKKMVSGRIDKTGFGKPLVKKIQTSLDFDNAEMKNSILSLMKESMSTFNEQEFIKNHQAFSTTPGLTETEFHKNLTQGKVESSIKAIQTALQRLEEGCSIEEAKAICDPGVLHQLFIWQTQLKVYLAPFLHGMRYTSFGRHFTKIDKLKEVVNRLHWYVQNGDTVLDFCCGSNDFSCLMKSKLEQMGKSCSFKNYDLFQPKNDFNFEKRDWMSVNAEELPHGSKLIIGLNPPFGVKGCLANKFINKALTFNPKLLILIVPKVTKRLDKRKGGYDLIWENDEMFSGKSFYLPGSVDVRDKQLEDWNLKPPPLYLWSHPDWTTKHRKIAQKQCHINEKYDVHVKNYLMEENHDCYQDYTGLHAPGDVLSIFDDIPCDNDDGADEEVATSNALGEVKGTVFSDCGGEMEMELPFDEAEEMCIDMELSTP* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0445 962 SMART PHD_3 335 401 IPR001965 -
Pvu10g0445 962 SMART PHD_3 268 334 IPR001965 -
Pvu10g0445 962 SMART PHD_3 208 263 IPR001965 -
Pvu10g0445 962 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 265 356 IPR013083 -
Pvu10g0445 962 CDD PHD2_NSD 268 333 - -
Pvu10g0445 962 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 264 IPR013083 -
Pvu10g0445 962 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 1 904 - -
Pvu10g0445 962 PANTHER EDM2-LIKE PROTEIN1 1 904 - -
Pvu10g0445 962 CDD PHD3_NSD 334 369 - -
Pvu10g0445 962 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 671 802 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0445 Pvu-Chr10 6447693 6456930 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0445 - - cam:101512524 1291.56