Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0443 ATGGCGAAAACAACTCACATTGTGGTTATTCCCAGTGCAGGGTTCAGCCATTTCGTTCCCATTATCCACTTCTCAAAGAGACTGGTTCAGCTTCACCCACATATTCACATCTCCTGCATCATTCCCATGCTAGGTTCTCTCCCAGCTGCTGCAAAACCCATTCTCCAAACCCTTCCACCAAACATCTCCACCATTTTTCTTCCGCCAGTGAACCTCCATGACCTCCCTCAAGGGCTTCCCGCAGTGGTCCAAATTCAGCTCGCCATGAGACACTCCATGCCCTCCATCCACCACACTCTCCAGTCCGTCACTTCCAACACCCCCCACGTGGCCATGGTGGTTGATTCTTTTGCCGCCGTAGCACTTGATCTCGCACACGAGTTCAACATGTTGTCCTATGTTTACTTCCCTATATCAGCCACCACACTCAGCATGCACTTGAATCTGCCAAGGTTGGACAAGGAAACAACTTGTGAGTACCGAAACCTGCCTCACCCTATCAAATTACCTGGTTGTGTGCCCTTTCATGGCCGTGATATCTATGCTCAAGCCCAAGATCGAACGAGTGAACTCTACAAAATGTCACTCAAACGGTACACACGGTGCCGTGCTGTTGATGGGATTTTCGTCAACAGTTTCTTGGCATTGGAAAAGGGTCCTATAACAGCATTGAAAGAGGAGAGAAGAGGGTACCCTCGTGTGTACCCTGTTGGACCGCTTGTGCAACAATCTGGTGATGATGATGATGATGATGCAAAAGGGTTGGAGCACTGTATAACATGGTTGGACACACAGAAAGTTGGTTCGGTTTTGTACGTTTCCTTTGGGAGTGGTGGAACACTCTCACGTGAGCAGATGAATGAGCTGGCTTATGGTTTGGAATTGAGTAATCACAAGTTCTTGTGGGTTGTGAGGGCACCCAATAATACAAAAGCTGATGCTGCTTACCTTGGTGGACACAACAACGTTGACCCTTTGCAGTTCTTGCCATGTGGGTTTTTGGAGAGAACCAAAGAGCAAGGTTTGATTGTTCCTTCATGGGCACCACAGGTTCAGGTTCTTAGCCACAGTGCAGTTGGTGGGTTTTTGAGTCACTGTGGCTGGAATTCGAGCCTTGAGAGTGTGGTGCATGGTGTGCCACTCATCACATGGCCACTGTATGCAGAGCAGAGAATGAATTCGGTTGTGCTGAGTGAGGGTCTCAAAGTGGGAGTGAGGCCAAGAGTTAGTGAAAAGGGGTTGGTGGAAAGGGTGGAAATTGTTCAGGTGATAAAGTGTTTGATGGAAGGGAAAGAAGGAAGGGAAATGCAGAAGAGAATGAAGGAGTTGAAAGAAGAGGCTACCATTGCTCTCAAAGAAGAAGGATCTTCTACCAAAACCCTTTCAGACCTAGCAGAAATGTGGAAAAAATTGGCATGGGAAAACCAGATTTATTGA 1437 0.4767 MAKTTHIVVIPSAGFSHFVPIIHFSKRLVQLHPHIHISCIIPMLGSLPAAAKPILQTLPPNISTIFLPPVNLHDLPQGLPAVVQIQLAMRHSMPSIHHTLQSVTSNTPHVAMVVDSFAAVALDLAHEFNMLSYVYFPISATTLSMHLNLPRLDKETTCEYRNLPHPIKLPGCVPFHGRDIYAQAQDRTSELYKMSLKRYTRCRAVDGIFVNSFLALEKGPITALKEERRGYPRVYPVGPLVQQSGDDDDDDAKGLEHCITWLDTQKVGSVLYVSFGSGGTLSREQMNELAYGLELSNHKFLWVVRAPNNTKADAAYLGGHNNVDPLQFLPCGFLERTKEQGLIVPSWAPQVQVLSHSAVGGFLSHCGWNSSLESVVHGVPLITWPLYAEQRMNSVVLSEGLKVGVRPRVSEKGLVERVEIVQVIKCLMEGKEGREMQKRMKELKEEATIALKEEGSSTKTLSDLAEMWKKLAWENQIY* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0443 478 Coils Coil 433 453 - -
Pvu10g0443 478 Gene3D Glycogen Phosphorylase B; 256 452 - -
Pvu10g0443 478 CDD GT1_Gtf-like 6 447 IPR002213 GO:0008194
Pvu10g0443 478 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 472 - -
Pvu10g0443 478 ProSitePatterns UDP-glycosyltransferases signature. 347 390 IPR035595 -
Pvu10g0443 478 PANTHER GLYCOSYLTRANSFERASE 1 472 - -
Pvu10g0443 478 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 470 - -
Pvu10g0443 478 Gene3D Glycogen Phosphorylase B; 6 457 - -
Pvu10g0443 478 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 269 397 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0443 Pvu-Chr10 6418598 6420240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0443 2 469 Glycosyltransferase AT1G01390 44.894 2.57e-143 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0443 K08237 - gmx:100800142 761.14