Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0439 ATGGAGAAAAAGGTTCACATAGCAGTAGTTCCTGGTCCTGGTTTTAGCCACTTGGTCCCAATTCTTCAATTCTCCAAGAGGCTTGTTGAGCTTCATCCAAACTTTCATGTCACATGCTTAATTCCCACACTTGGTTCTCCCCCAAGTGCCTCAAAATCCATCCTTGAAACTCTTCCACCAAACATCAAATCCATTTTTCTTCAACCTGTCAAATCTGAGGACCTACCACAAAGGGTTGCCTTAGAAACTCAGATTCAGTTCACAGTCACTCTCTCTCTCCCATCTATACACCAGACCTTGAAGACCTTAACTTCAAAGACCCCCTTTGTGGCCTTGGTGGCTGATTCTTTTGCCTTTGAAGCATTGGATTTTGCTAAGGAGTTCAACTTGTTGTCCTATATTTACTTCCCTTCATCTGCAACAACACTTTCTTGGTACTTTTATGTGCTCAAGTTGGACAAGGAAACATCATGCGAGTACCGAGACTTGCCTGAGCCTGTTAAAATACCAGGCTGTGTTCCAATTCATGGCAGGGATCTCAATAACCAAGCTCAGGACCGATCAAGTCAAGTTTACAAACTCTTCCTCCAACGCGTTCAGCGGTTCTTTTTTGTTGATGGGATTTTCGTTAACAGCTTCTTTGAAATGGAAGCAAGTCCTATAAGAGCATTGAAAGAGGAGGGAAGAGGGTACCCTCTAGTGTATCCTGTTGGACCAATTGTTCAAACTGGTGATGATGCAAAAGGGTTGGAGTGTTTAACGTGGTTGGACAAACAAGAAGTTGGTTCAGTTTTGTATGTTTCTTTTGGGAGTGGTGGAACACTCTCACAAGAACAAGTGAACGAGCTAGCTTATGGTTTGGAATTGAGTAATCACAAGTTCTTGTGGGTTGTGAGAGAACCGAGTAGTTTAGCCTTTGATGCATATCTGAGTGCAAAAAAGGATGTTGATCCTTTGCATTTCTTGCCAGGTGGGTTTTTGGAGAGAACCAAAGAGCAAGGTTTGGTTATTCCTTCATGGGCACCCCAGATTCAAGTCCTTGGTCACAGTTCAGTTGGAGGGTTTTTGACTCACTGTGGTTGGAATTCAATCCTTGAGAGTGTGGTGCATGGTGTGCCACTCATCACATGGCCACTGTTTGCAGAGCAGAGAATGAATGCCGTTGTGCTGAGTGAGGGTCTCAAAGTGGGAGTGAGGCCAAGAGTTGGTGAAAATGGGTTGGTGGAAAGGGTGGAAATTGTGGAGGTGATAAAGTGTTTGATGGAAGGGGAAGAAGGTGGGAAAATGCACAAAAGAATGGAGGAATTAAAAGAAGCTGCTAATAATGCACTAAAAGAAGATGGATCTTCTACAAAGACCCTTTCAGAGTTGGTACTAAAATGGGAAAACTTGGTTTAG 1398 0.4342 MEKKVHIAVVPGPGFSHLVPILQFSKRLVELHPNFHVTCLIPTLGSPPSASKSILETLPPNIKSIFLQPVKSEDLPQRVALETQIQFTVTLSLPSIHQTLKTLTSKTPFVALVADSFAFEALDFAKEFNLLSYIYFPSSATTLSWYFYVLKLDKETSCEYRDLPEPVKIPGCVPIHGRDLNNQAQDRSSQVYKLFLQRVQRFFFVDGIFVNSFFEMEASPIRALKEEGRGYPLVYPVGPIVQTGDDAKGLECLTWLDKQEVGSVLYVSFGSGGTLSQEQVNELAYGLELSNHKFLWVVREPSSLAFDAYLSAKKDVDPLHFLPGGFLERTKEQGLVIPSWAPQIQVLGHSSVGGFLTHCGWNSILESVVHGVPLITWPLFAEQRMNAVVLSEGLKVGVRPRVGENGLVERVEIVEVIKCLMEGEEGGKMHKRMEELKEAANNALKEDGSSTKTLSELVLKWENLV* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0439 465 Gene3D Glycogen Phosphorylase B; 245 445 - -
Pvu10g0439 465 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 458 - -
Pvu10g0439 465 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 247 390 IPR002213 GO:0008194
Pvu10g0439 465 ProSitePatterns UDP-glycosyltransferases signature. 340 383 IPR035595 -
Pvu10g0439 465 CDD GT1_Gtf-like 6 461 IPR002213 GO:0008194
Pvu10g0439 465 Gene3D Glycogen Phosphorylase B; 6 450 - -
Pvu10g0439 465 PANTHER GLYCOSYLTRANSFERASE 1 464 - -
Pvu10g0439 465 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0439 Pvu-Chr10 6363284 6364941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0439 6 462 Glycosyltransferase AT1G01420 48.485 2.03e-158 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0439 K08237 - gmx:100778639 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0439 10 6363284 6364941 Pvu8g1455 8 23696331 23697931 PCT