Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0434 ATGGCATCAACGTTTCTCACCCTACCAACTCCCTTCCTACACAAAACCAATGCCATTTCTTTCTCTAACAAGAGACCCTCATTTTCGCAGAGGAGCTCTCTGAAGATCAATGCAATTGCAAAAAAATGGGAACCTACTAAGGTTGTGCCTCAGGCTGATAGAGTTCTTATTCGTTTGGAAGAGCTATCAGATAAAACAGCTGGGGGAGTTTTGCTGCCCAGGTCAGCTGTGAAATTTGAGAGATATCTCGTGGGAGAAATTCTAAATGTTGGTGCTGAGGCTGGAGAACTAAAGGCTGGAACAAAGGTACTCTTCACTGACATGAGTGCTTATGAGGTGGATTTGGGAACTGATGCGAAGCACTGCTTCTGTAAAGCAAGTGACTTGTTGGCTGTGGTTGAGTAG 405 0.4469 MASTFLTLPTPFLHKTNAISFSNKRPSFSQRSSLKINAIAKKWEPTKVVPQADRVLIRLEELSDKTAGGVLLPRSAVKFERYLVGEILNVGAEAGELKAGTKVLFTDMSAYEVDLGTDAKHCFCKASDLLAVVE* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0434 134 Gene3D GroES chaperonin 43 134 IPR037124 GO:0006457
Pvu10g0434 134 PANTHER 10 KDA CHAPERONIN 1, CHLOROPLASTIC-RELATED 15 133 - -
Pvu10g0434 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
Pvu10g0434 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Pvu10g0434 134 Pfam Chaperonin 10 Kd subunit 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Pvu10g0434 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 15 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Pvu10g0434 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0434 Pvu-Chr10 6274189 6277504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0434 15 134 Calmodulin-binding Proteins AT5G20720 26.515 2.44e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0434 K04078 - gmx:100306026 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0434 10 6274189 6277504 Pvu10g0434 10 6274189 6277504 ECH