Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0426 ATGACGAGCATGGAGAGTTTGATCGGTTTGGTGAACAGAATCCAGCAGGCCTGCACCGTGCTCGGCGACTACGGCGGCGACGCCGATAGCAACGCCTTCTCGTCTCTATGGGAAGCTCTTCCTTCCGTAGCCGTCGTCGGAGGCCAGAGTTCGGGTAAGTCTTCGGTTCTGGAAAGCATCGTTGGACGTGACTTTCTTCCTAGAGGATCAGGGATTGTGACGAGGCGTCCATTAGTGTTGCAGCTTCATAAGGTTGATGGCAAAGCGAAGGAGTATGCAGAGTTTCTTCACATGCCAGGGCAAAAGATCACTGATTATGCCTTTGTTCGCCAGGAGATTCAGAATGAAACTGATAGAGTAACAGGGAGGACAAAGCAAATATCTCCTGTTCCAATTCATCTTAGCATTTACTCTCCACACGTTGTCAACCTAACTTTGATTGATTTGCCTGGATTGACTAAAGTTGCTGTAGAGGGACAGCCTCAGACTATTGTCGAAGACATTGAAAATATGGTTCGGTCTTATGTTGAGAAGCCTAATTGTATTATACTGGCAATATCTCCAGCAAACCAAGACATAGCCACTTCTGATGCTATTAAGCTTTCAAAGGAGGTGGATCCCTCAGGTGAGAGGACATTTGGAGTGTTGACAAAGCTTGATTTAATGGACAAAGGAACTAATGCCTTGGATGTCCTTGAAGGAAGATCTTACCGTCTGCAACATCCCTGGGTTGGTGTAGTAAATCGATCCCAAGCAGATATCAATAAAAACGTTGATATGATTGTTGCTAGACGTAAGGAGAGTGAGTATTTTGAAACCAGTCCCGACTATGGACACTTAGCCAATAAAATGGGTTCTGTATTCCTTGCAAAACTTCTCTCACAGAATTTGGAGTCAGTAATTAGGGCACGGATACCCAGTATAACATCTTTGATAAACAAAACAATTGAAGAACTTGAATCAGAGATGAATCAAATTGGGAGACCAATTGCTGTTGATGCAGGAGCTCAACTATACACCATCCTAGAACTATGCCGCGCATTTGATAAGATATTCAAGGAACATTTAGACGGAGGGCGAGCGGGTGGAGATAAAATCTATAATGTCTTTGACAATCAGCTTCCTGCTGCATTAAGGAAGCTTCCATTTGACCGTCACCTATCTCTTCAAAATGTAAGGAAAGTGGTATCAGAGGCAGATGGTTACCAGCCTCACTTAATTGCCCCAGAGCTAGGTTACCGGCGCCTGATCGAGGGAGCTCTCAGCTACTTTAGAGGCCCAGCTGAAGCTTCAGTTGATGCAGTTCACTTTGTCTTGAAAGAACTTGTGAGGAAAGCAATAGCTGAAACTCAGGAACTGAGACGTTTCCCAACTCTTCAAGCCGAACTTGCTGCTGCTACAAGTGAAGCTTTAGAGAGGTTCCGTGAAGAGAGTAAGAAGACAGTTATTCGACTTGTCGACATGGAAGCTTCGTATCTCACTGTGGAGTTCTTCCGGAGACTTCCTCAAGAAATGGAGAAAGCCGGAAATCCAGCTAATCCAGCTACTACCCCAAATGAGGATCGATATGGAGAAGGGCATTACAGGAGGATTGGATCAAATGTATCTTCCTATATTGGTATGGTGTCAGACACTCTCAGGAACACTATCCCAAAGGCTGTGGTTTTTTGTCAAGTCAGAGAAGCAAAACTATCATTGCTAAACCATTTCTACACAGTAATAGGGAAGAAAGAGGCTAAACAGCTATCCCAGTTGTTAGATGAAGACCCTGCCTTGATGGAGAGGAGGCAACAATGTGCCAAAAGGCTTGAACTATATAAAGCAGCAAGGGATGAAATTGATTCTGTTTCCTGGTCACGTTGA 1863 0.445 MTSMESLIGLVNRIQQACTVLGDYGGDADSNAFSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKVDGKAKEYAEFLHMPGQKITDYAFVRQEIQNETDRVTGRTKQISPVPIHLSIYSPHVVNLTLIDLPGLTKVAVEGQPQTIVEDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLSKEVDPSGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGVVNRSQADINKNVDMIVARRKESEYFETSPDYGHLANKMGSVFLAKLLSQNLESVIRARIPSITSLINKTIEELESEMNQIGRPIAVDAGAQLYTILELCRAFDKIFKEHLDGGRAGGDKIYNVFDNQLPAALRKLPFDRHLSLQNVRKVVSEADGYQPHLIAPELGYRRLIEGALSYFRGPAEASVDAVHFVLKELVRKAIAETQELRRFPTLQAELAAATSEALERFREESKKTVIRLVDMEASYLTVEFFRRLPQEMEKAGNPANPATTPNEDRYGEGHYRRIGSNVSSYIGMVSDTLRNTIPKAVVFCQVREAKLSLLNHFYTVIGKKEAKQLSQLLDEDPALMERRQQCAKRLELYKAARDEIDSVSWSR* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0426 620 CDD DLP_1 40 306 IPR001401 GO:0003924|GO:0005525
Pvu10g0426 620 SMART GED_2 523 616 IPR003130 GO:0003924|GO:0005525
Pvu10g0426 620 Pfam Dynamin GTPase effector domain 525 616 IPR003130 GO:0003924|GO:0005525
Pvu10g0426 620 Gene3D - 4 315 IPR027417 -
Pvu10g0426 620 PRINTS Dynamin signature 40 58 IPR022812 -
Pvu10g0426 620 PRINTS Dynamin signature 65 82 IPR022812 -
Pvu10g0426 620 PRINTS Dynamin signature 138 155 IPR022812 -
Pvu10g0426 620 PRINTS Dynamin signature 188 206 IPR022812 -
Pvu10g0426 620 PRINTS Dynamin signature 207 223 IPR022812 -
Pvu10g0426 620 PRINTS Dynamin signature 230 249 IPR022812 -
Pvu10g0426 620 PANTHER DYNAMIN 1E-LIKE PROTEIN 3 619 - -
Pvu10g0426 620 PANTHER DYNAMIN 3 619 IPR022812 -
Pvu10g0426 620 Pfam Dynamin central region 227 494 IPR000375 -
Pvu10g0426 620 Gene3D Dynamin, middle domain 332 586 - -
Pvu10g0426 620 ProSiteProfiles GED domain profile. 528 620 IPR020850 -
Pvu10g0426 620 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 66 75 IPR019762 -
Pvu10g0426 620 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 37 306 IPR030381 GO:0005525
Pvu10g0426 620 MobiDBLite consensus disorder prediction 506 526 - -
Pvu10g0426 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 314 IPR027417 -
Pvu10g0426 620 Pfam Dynamin family 43 218 IPR045063 -
Pvu10g0426 620 SMART dynamin_3 4 257 IPR001401 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0426 Pvu-Chr10 6074155 6081593 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0426 - - gmx:100790977 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0426 10 6074155 6081593 Pvu10g0426 10 6074155 6081593 ECH