Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0423 ATGGCATCAAAACCTGGCATTCTCACCCATTGGCCATGGGAGCCTCTCGGGAGCTTCAAGTGGGTGATTCTGACACCATGGATTGTTCATAGCACTTACTCCTTCATAGTGAATGATCCAAAGGATAGAGAACTTGCCTACTTCCTCATCTTCCCCTACATGTTGGTGAGGATGCTGCATGACCAAATTTGGATCACACTTTCTCGCCATAGAAATGCCAAAGGCAAAAGCAGAATCGTTGACAAGGGCATTGAGTTTGAACAAGTTGATCGAGAAAGCAATTGGGATGACCAGATCTTGTTCAATGGGATCTTGTTTTATGCAGGTCATATGTTAATTCCAGAAGCTTCTAAGATGCCCTTCTGGAGAATGGATGGAGTGGTTATCACTGCTGTTTTACATGCAGGAGCAGTGGAGTTTCTGTATTATTGGTTACACAGAGCACTTCACCACCATTTTCTCTACTCCAGATACCATTCTCACCACCACTCTTCCATTGTCACAGAACCCATTACTTCTGTGATCCATCCATTTGCAGAACACATAGCATACTTTCTGTTATTTGCAATCCCATTGTACACAACTGTGGTTACAAGAACAGCTTCTATAGTATCATATGCTGGTTATCTTGCATACATTGATTTCATGAACAATTTGGGTCACTGCAATTTCGAGTGCATTCCAAAGCCCATTTTCTCTACATTTCCCTTCCTCAAGTACTTCATGTACACTCCAACGTTTCACTCACTGCATCATACCCAGTTTAGGACCAATTACTCACTCTTCATGCCCATCTATGATTACATTTATGGCACCATGGACAAGACAACAGACAGCACATATGAAACATCATTGAAGAGAGAAGAAACATCACCTGATGTGGTTCATCTAACACATCTTACAACCCCAGAATCCATTTATCATCTGAGGTTGGGATTTGCTTCCTTAGCCTCCAAACCTCAATCTTCAACATGGTACCTTTATTTGATGTGGCCTTTCACTCTTTGGTCTGTTCTTGTGACTTGGTTTTATGGTCAAACATTTGTCATGGAGAGAAATGCTTTCAAAATGCTCAATTTGCAATCATGGGTTATACCTAGATTCCATGTACAATACCTTTTCAAATGGCAAAGTGAAACTCTAAACAAACTTATAGAAGAAGCAATACTTGAAGCAGAGTTAAGCAAAGCAAAGGTTTTAAGTCTAGGTCTTTCAAACCAGGGAGATTCCCTGAATAAATATGGTGAACTTTACATCAGAAGGTTTCCTGAGCTTAAGATAAAGATTGTGGATGGCAGTAGCTTAGTTGTGGCCATTGTTCTTAACAGTATTCCTAAAGAAGCAACTCAAGTGCTTCTTTGTGGAAAACCTAATAAGATTTCATATGCCATTGCTAGTGCTTTATGTGAAAGGGGTACAAAGGTTACAACTATGTCTAAAGAAGAATATGATAATCTTGAATTAAGACTTTCCAATGAGTCCAAAAAGAACTTGGTTTTCCCAGGATCCTATACTGCAAAGATTTGGCTAGTAGGAGAGCAATGTAATGAAGCAGAACAAAAGAAGGCACCAAAAGAATCATTGTTCATTCCTATTTCCCAATTCCCTCCAAAGAAACTTCGTAGAGACTGCTACTACCACATCACACCAGCCATGATAGCTCCACCTTCATTAGTCAATGTGGACTCTTGTGAGAATTGGCTGCCAAGGAGAGTGATGAGTGCATCGCGTGTGGCCGGAATAGTGCATGCCCTAGAAGGTTGGAACGTTCATGAATGTGGAAATTTCACGTTTAGTGCTGAGAAAATATGGCAAGCAAGTCTTCACCATGGCTTTAGACCATTCAAGATTAACCCTCTTTCTTCAATTCTTAATTAA 1878 0.4036 MASKPGILTHWPWEPLGSFKWVILTPWIVHSTYSFIVNDPKDRELAYFLIFPYMLVRMLHDQIWITLSRHRNAKGKSRIVDKGIEFEQVDRESNWDDQILFNGILFYAGHMLIPEASKMPFWRMDGVVITAVLHAGAVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLYTTVVTRTASIVSYAGYLAYIDFMNNLGHCNFECIPKPIFSTFPFLKYFMYTPTFHSLHHTQFRTNYSLFMPIYDYIYGTMDKTTDSTYETSLKREETSPDVVHLTHLTTPESIYHLRLGFASLASKPQSSTWYLYLMWPFTLWSVLVTWFYGQTFVMERNAFKMLNLQSWVIPRFHVQYLFKWQSETLNKLIEEAILEAELSKAKVLSLGLSNQGDSLNKYGELYIRRFPELKIKIVDGSSLVVAIVLNSIPKEATQVLLCGKPNKISYAIASALCERGTKVTTMSKEEYDNLELRLSNESKKNLVFPGSYTAKIWLVGEQCNEAEQKKAPKESLFIPISQFPPKKLRRDCYYHITPAMIAPPSLVNVDSCENWLPRRVMSASRVAGIVHALEGWNVHECGNFTFSAEKIWQASLHHGFRPFKINPLSSILN* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0423 625 Pfam Fatty acid hydroxylase 132 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Pvu10g0423 625 Pfam WAX2 C-terminal domain 451 614 IPR021940 -
Pvu10g0423 625 PANTHER STEROL DESATURASE 1 617 - -
Pvu10g0423 625 PANTHER VERY-LONG-CHAIN ALDEHYDE DECARBONYLASE CER1 1 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0423 Pvu-Chr10 6001122 6011332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0423 1 620 Lipid Metabolism Gene Families AT1G02190 55.397 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0423 K15404 - gmx:100790115 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0423 10 6001122 6011332 Pvu10g0423 10 6001122 6011332 ECH