Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0419 ATGGCGGTTAGGCAAAGAGCAGCATCTGCACTTCCAACCCTTTTACGCACTCTTCGCAAAGAACCGTTAAAGCCTCACAGCCATGTCAATGCGTTACCCTCTCTTCGACGCGCTTTCTCTTTGTACGATCAGATCAATCTCATCGATCAAGTCCCCGAGGACCAGCTCCGATTTCAAGGGTATAATGATACGGGGTTTACTGTAAATGGGGTTGAGTATGAAGGAAGCTTGCTTTGTGTTGGAAATTTGCTCATGTCTTGGAAACCTAAGAAGTTTTCAGAGATCACCGCTGATAGCTTGTCGCTCTTCAAAGTTATTCGTCCTATTCCAGAGATTTTGATTCTTGGCTGTGGAAGGGACATTCAACATGTAGATCCTGAACTGAGACAGTTTATTCGATCTACTGGCGTGAAGTTAGAAGCTGTAGACTCGAGAAATGCAGCATCAACTTACAACATACTGAATGAAGAAGGTCGAATTGTGGCTGCTGCACTTCTTCCACATGGAGTTTCTTCATGA 519 0.4451 MAVRQRAASALPTLLRTLRKEPLKPHSHVNALPSLRRAFSLYDQINLIDQVPEDQLRFQGYNDTGFTVNGVEYEGSLLCVGNLLMSWKPKKFSEITADSLSLFKVIRPIPEILILGCGRDIQHVDPELRQFIRSTGVKLEAVDSRNAASTYNILNEEGRIVAAALLPHGVSS* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0419 172 Pfam Protein of unknown function (DUF498/DUF598) 59 166 IPR007523 -
Pvu10g0419 172 PANTHER NUCLEAR PROTEIN E3-3 1 172 IPR007523 -
Pvu10g0419 172 SUPERFAMILY MTH938-like 45 168 IPR036748 -
Pvu10g0419 172 Gene3D - 42 168 IPR036748 -
Pvu10g0419 172 CDD Mth938_2P1-like 56 169 IPR034095 GO:0032981
Pvu10g0419 172 PANTHER BNAC04G03830D PROTEIN 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0419 Pvu-Chr10 5850105 5854169 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0419 K09008 - gmx:100816956 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0419 10 5850105 5854169 Pvu10g0419 10 5850105 5854169 ECH