Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0409 ATGGCAGAAGTGAGGAACATGCAAGTGGTTCTGAGAGACTATGTGGCTGGTTTTCCGAAGGAATCAGACATGAACATTCTGGAAGGAAGCATAAGATTGAAGGTTCCAGAAGGTTCGAATGAGGTTCTTGTGAAAAACCTGTATCTCTCTTGCGACCCTGTCATGAGAATCATGATGATCAAGGTGGAAGCCATTGATGAGTATCGTCACTACACACCAGCTTCTCCATTGACAGGTTATGGTGTGTCTAAAGTGGTGGAATCTGGACATCCAGATTATAAGAAGGGTGATTTAGTTTGGGGAATTACTAAATGGGAAGAATATAGCTTTATCACCTCATCTCAAATATGCTTCAAAATTGAGCACACTGATGTTCCACTTTCCTACTACACTGGAATTCTTGGTATGCCAGGAATGACTGCTTATGCTGGTTTCTTTGAAGTAGGTTCTCCCAAAAAAGGAGATAATGTTTTTGTTTCAGCTGCCTCTGGTGCTGTTGGTCAACTTGTTGGCCAATTTGCCAAGTTGAGTGGTTGTTATGTTGTTGGCAGTGCTGGAAGCAAAGAGAAGGTGGATCAATTGAAGAATAAATTAGGATTTGATGAAGCCTTTAACTACAAGGAGGAGGCAGACTTCAATTCAGCTTTGAAAAGGTACTTTCCTGAAGGCATTGATATTTACTTTGAAAATGTTGGGGGCAAGACACTTGATGCAGTACTCCCAAATATGAGACTCCATGGTCGAATACCTGTTTGTGGAATGATCTCTCAGTACAATCTTACTCAACCAGAAGGGATAACAAATTTGGCACATCTCATATTTAAGAGAGTTAAAATGGAAGGTTTTGTTGTAAATGATTTCTACCATTCATATTCAAAATTCTTGGAGTTTGTCTTACCTAAGATCACAGAAGGAAAAGTTCTGTATGTGGAAGACATTGTTGAGGGTCTTGAGAATGGCCCCGCAGCGTTGGTTGGCCTCTTTAGTGGTCGCAATGTCGGCAAACAAGTAGTGGTTGTTTCTTGTGAGTAA 1032 0.4079 MAEVRNMQVVLRDYVAGFPKESDMNILEGSIRLKVPEGSNEVLVKNLYLSCDPVMRIMMIKVEAIDEYRHYTPASPLTGYGVSKVVESGHPDYKKGDLVWGITKWEEYSFITSSQICFKIEHTDVPLSYYTGILGMPGMTAYAGFFEVGSPKKGDNVFVSAASGAVGQLVGQFAKLSGCYVVGSAGSKEKVDQLKNKLGFDEAFNYKEEADFNSALKRYFPEGIDIYFENVGGKTLDAVLPNMRLHGRIPVCGMISQYNLTQPEGITNLAHLIFKRVKMEGFVVNDFYHSYSKFLEFVLPKITEGKVLYVEDIVEGLENGPAALVGLFSGRNVGKQVVVVSCE* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0409 343 SUPERFAMILY GroES-like 286 338 IPR011032 -
Pvu10g0409 343 Gene3D - 133 309 - -
Pvu10g0409 343 Gene3D - 8 338 - -
Pvu10g0409 343 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1 342 - -
Pvu10g0409 343 PANTHER PROSTAGLANDIN REDUCTASE 1 342 IPR045010 GO:0016628
Pvu10g0409 343 SMART PKS_ER_names_mod 29 338 IPR020843 GO:0016491
Pvu10g0409 343 CDD double_bond_reductase_like 4 340 - -
Pvu10g0409 343 Pfam N-terminal domain of oxidoreductase 8 114 IPR041694 -
Pvu10g0409 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 132 302 IPR036291 -
Pvu10g0409 343 Pfam Zinc-binding dehydrogenase 165 298 IPR013149 -
Pvu10g0409 343 SUPERFAMILY GroES-like 4 170 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0409 Pvu-Chr10 5766668 5772081 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0409 K19825 - gmx:100811802 588.956